| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0853 |
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| Symbol | |
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| ID | 5170523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 868962 |
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| End bp | 870839 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563372 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001244448 |
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| Protein GI | 148269988 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.157029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGT TTCTTGTAGT TTTGTTCGTC GTTTCCATGT TCAGTCTGTT CTTTGCACAG
CTTCCACCCA ATATTCCGAG GAATGAGACT TTCATTGCGC AGGTTTTGAC CGGAAGAGCA
GCCAACCCCA CCAACTTCAA CGTGTGGACA GGATGGGTTT GGCAGGACAG GGGTGTTCAG
AACTTGCTTC TGGAACCGCT CTGGTACGTG GATTTCGCAA CTGGAGAGAT CATAAACGCA
CTTGCCGAAT CTCTCCCGAC CTACAATTCT GACTTCACAG AACTCACCAT CAAACTCAGA
AAAGGTGTAT ATTGGAGCGA TGGAGAACCA TTCACAGCGG ATGACGTTGT GTTCACAATC
GAAACAATCA TGAGCACTCC AGCGTTTGGA TACCATCAGG AACTGGTCAA CGAGGTTGAA
AACGTCGAGA AATTGGACGA CTACACCGTG AAAATAAAAC TCAAGAGACC AAACGCCAGG
TTCCACACTT ATTTCCTCGA CAGATGGGGC GGAATAAGAC CTATGCCAAA ACACGTTTTT
GAAAAGGTTG AAGATCCTGT TAACTTTGAA TTCAATCCAC CCGTTGGAAC CGGCCCATAC
GTGCTCCATT CTGTCGATCC AGGAGGATAC TGGACACTCT GGCAGAGAAG AGAAGACTGG
GACAGAACAC CGACTGGTAT GCTCTTTGGA ATGCCACAAC CCAAGTACGT ACTCTTCATA
GATTACGGTT CCCCGGAAAA ACAGGTCCTT GCCATGGCAC AGCATCAGCT TGACGAAGCA
ATCCTCACGA TAGAAGCGCT CAAAGCGGTT CTCAACAGAG TCAAAACAGC CAGAGCCTGG
AGGAAAAACT TCCCGTGGAC TGTAAACAAC GATCCATGTG TGACAGGATT TGTCTTCAAC
ACAGCGAAAG AGCCATTCAA CAACATCGAA GTTAGATGGG CACTCACACT CGCAATTGAT
ATTGTTGAAT ACGCTGCCAA CGCTTTCGAT GGTGCCGTAA CGCTTTCGCC TATCCACATA
CCACTTTCAA CCGCATACTA CAACTGGTAT TTCGCAAGGC TTGAAGACTG GCTCAAAAAT
TACGAAATCG ATCTTGGAAA CGGAGAGAAA TTCAAGCCAT ACGATCCAGA AGCAGGCCTT
AGGTTAGCAG AATATGCAAA GAAGAGAGGC TATTCTGTAC CTGATAATCC TGAAATAATT
AAGAGAACTT TCGGACCTGG TTGGTGGAAG TATGCCCCCG ATGTTGCAGC AAAACTTCTG
GAAAAGAACG GATTCTACAG AGATAAGAAT GGAAAATGGC ATCTGCCGAA TGGAGATCTG
TGGCAGATAA CAATAATTGC CCCCACCAAT CCATCTGATC CTGCTTACAG AAACGCATTT
GCTCTCTCCC AGGCGTGGAA GAAATTCGGA ATAGATGCGG TCGTTCAGAC TTCCGAAAAT
GCAAACTCGT TTGGTTCGGA GGGTAACTTC GATGTTCACA CCGCATGGCC AGCCGCAGAA
CCTTGGGGTG GTCATCCAGA CCTTTACAGG ACACTCTATC CATTCCATTC TGAGTACGTT
GTTCCAATAG GTGAAAATGC AACATGGGGT AATTACTGCA GGTGGTCCGA CCCAAGGCTT
GACAAAATAA TCGAAGAACT CAAGAATACA CCATGGGGTA ACACTCAAAA ACTCATAGAA
CTCGGTACCG AAGCTCTTAA GATAATCGTT GAAGGACTTC CAAGTGTTCC GACATTCAAC
TATCCTGGTG TTATCGCATG GGATGAATAC TACTGGACGA ATTATCCTGG AGCAGAAAAT
CCATACTCGC AGCCCTACCA GCACTGGCCG AACTTCAAGT ACATGCTCCC GAAGCTGAAA
CCAACCGGTA GAAAATGA
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| Protein sequence | MKKFLVVLFV VSMFSLFFAQ LPPNIPRNET FIAQVLTGRA ANPTNFNVWT GWVWQDRGVQ
NLLLEPLWYV DFATGEIINA LAESLPTYNS DFTELTIKLR KGVYWSDGEP FTADDVVFTI
ETIMSTPAFG YHQELVNEVE NVEKLDDYTV KIKLKRPNAR FHTYFLDRWG GIRPMPKHVF
EKVEDPVNFE FNPPVGTGPY VLHSVDPGGY WTLWQRREDW DRTPTGMLFG MPQPKYVLFI
DYGSPEKQVL AMAQHQLDEA ILTIEALKAV LNRVKTARAW RKNFPWTVNN DPCVTGFVFN
TAKEPFNNIE VRWALTLAID IVEYAANAFD GAVTLSPIHI PLSTAYYNWY FARLEDWLKN
YEIDLGNGEK FKPYDPEAGL RLAEYAKKRG YSVPDNPEII KRTFGPGWWK YAPDVAAKLL
EKNGFYRDKN GKWHLPNGDL WQITIIAPTN PSDPAYRNAF ALSQAWKKFG IDAVVQTSEN
ANSFGSEGNF DVHTAWPAAE PWGGHPDLYR TLYPFHSEYV VPIGENATWG NYCRWSDPRL
DKIIEELKNT PWGNTQKLIE LGTEALKIIV EGLPSVPTFN YPGVIAWDEY YWTNYPGAEN
PYSQPYQHWP NFKYMLPKLK PTGRK
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