| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0852 |
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| Symbol | |
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| ID | 5170931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 867881 |
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| End bp | 868888 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563371 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244447 |
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| Protein GI | 148269987 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.707865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGCTTTG TAAGGAGATA CCTGCTTCCA AGATTGATAA CTTACTTTCT CGTGGTTTTT
GTGGGTTTAA CGATTGTGTT TTTCTTGCCG AGATTCCTTC CGAGTGATCC TATACAGGCT
TACATCGATC GACTCATAAC ACAGGGAGGA AATTTGAATC CAGAGTACTT CGACAAACTT
GTGGAAACGA TCAAGGAACT TTATGGTTTG CAGGGAAGCC TGTGGGATCA GTACGTCAAC
TTCTGGAAAA GACTTTTAAA AGGCGATTTT GGTCCTTCAT ACTTTCAGTT TCCAACTCCT
GTGATGAAAT TAATAAGACA ATCATTGCCC TGGACTGCCT GGCTCTTGTT TGTAACGACT
GTCATTTCCT GGATCATAGG AAACATTCTT GGAGGACTCG CAGGATACTT CTCTGACAGA
AAATGGGTGA AGATTCTCGA TGGTATTGCG ATGGTGATAA GACCGATGCC GTACTACATC
CTCGCACTCG GACTTTTGAT CCTCCTTGCG TATATACTTC CCATCTTTCC AATCGGCGGA
GGTTTTGCAA TAGGAATGCA GTTCACCTTC AGCTGGGAAA ACCTGCTGAT ACTCCTAAAA
CACGCTTTCC TTCCAGCTCT TTCTTTAGTT CTAATAGGTG TGTTTTCCTG GTTTCAAGCC
ATGAAGCTTG TGGTTCAAAG TGTGAAAACA GAAGACTACG TGAAATACGC AAAGATGGGA
GGAATAGAAG AAAGAAGAAT CGTTCGAAGA TATGTCATAA GAAACGCTAT GTTACCACAG
ATAACGGGTC TTGCTCTCTC TCTGGGACAG ATCTTTGGAG GTGCTTTGAT CACAGAGATC
GTGTTCTCCT ATCCCGGTAT TGGATCTCTT CTTTACAACG CCATTTTCAC GGGTGATTAC
AATCTCTTAA TGGGTATAAG TACCCTCTCC ATACTTCTCG TTACAACCAG TATACTTGTG
ATCGATCTGC TTTATCCACT GTTTGATCCG AGAGTGAGAT ACAGATGA
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| Protein sequence | MSFVRRYLLP RLITYFLVVF VGLTIVFFLP RFLPSDPIQA YIDRLITQGG NLNPEYFDKL
VETIKELYGL QGSLWDQYVN FWKRLLKGDF GPSYFQFPTP VMKLIRQSLP WTAWLLFVTT
VISWIIGNIL GGLAGYFSDR KWVKILDGIA MVIRPMPYYI LALGLLILLA YILPIFPIGG
GFAIGMQFTF SWENLLILLK HAFLPALSLV LIGVFSWFQA MKLVVQSVKT EDYVKYAKMG
GIEERRIVRR YVIRNAMLPQ ITGLALSLGQ IFGGALITEI VFSYPGIGSL LYNAIFTGDY
NLLMGISTLS ILLVTTSILV IDLLYPLFDP RVRYR
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