| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0848 |
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| Symbol | |
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| ID | 5171732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 862674 |
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| End bp | 865010 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640563367 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001244443 |
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| Protein GI | 148269983 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGT ACAGGGATCC TTCGCAACCC ATTGAAGTGA GAGTGAGAGA TCTTCTTTCC
AGAATGACGC TGGAAGAGAA AGCAGCCCAG CTTGGGTCTG TCTGGGGTTA CGAACTGATA
GACGAGAGAG GAAAGTTCAG TAGAGAAAAA GCAAAAGAAC TCCTCAAAAA TGGTATTGGT
CAGGTCACGA GGCCCGGTGG ATCGACGAAC CTTGAACCTC AAGAAGCCGC GGAACTTGTG
AACGAAATAC AGAGATTTCT CGTGGAAGAA ACACGCCTTG GAATTCCTGC GATGATACAC
GAGGAATGTC TCACCGGTTA CATGGGACTT GGAGGAACCA ACTTCCCTCA GGCAATAGCA
ATGGCGAGTA CATGGGATCC GGATCTCATA GAAAAAATGA CCACCGCCAT CAGAGAGGAT
ATGAGAAAGA TAGGAGCACA TCAGGGTCTC GCACCCGTTC TGGATGTCGC AAGAGACCCG
AGGTGGGGAA GAACGGAAGA AACGTTCGGA GAATCTCCCT ACCTGGTGGC GAGGATGGGA
GTCTCTTACG TAAAAGGCCT CCAAGGTGAG GATATCAAAA AAGGTGTCGT TGCCACAGTG
AAACACTTCG CCGGATACAG CGCTTCTGAA GGCGGAAAGA ACTGGGCCCC AACGAACATT
CCGGAGAGGG AATTCAAAGA GGTCTTTCTC TTTCCGTTCG AAGCGGCTGT TAAAGAAGCG
AATGTGCTTT CTGTGATGAA CTCCTACAGC GAGATAGACG GTGTCCCATG TGCAGCGAAC
AGGAAACTCC TCACAGACAT TCTCAGAAAA GACTGGGGGT TCAAAGGAAT CGTCGTTTCT
GACTATTTCG CTGTGAAAGT TCTGGAAGAT TATCACAGAA TAGCAAGGGA TAAGTCAGAA
GCCGCAAGAC TCGCGCTCGA AGCGGGGATA GATGTTGAAC TTCCGAAGAC AGAATGTTAT
CAATATTTGA AAGACCTTGT TGAAAAAGGC ATCATCTCCG AAGCTTTGAT CGACGAGGCA
GTCGCCAGGG TGCTGAGGCT GAAGTTCATG CTCGGACTCT TCGAGAATCC CTACGTTGAG
GTGGAAAAAG CGAAAATAGA AAGCCACAAA GACATCGCAC TCGATATAGC AAGGAAATCC
ATTATCCTTC TCAAGAATGA TGGAATTTTG CCTCTTCAGA AAAACAAAAA AGTTGCCCTG
ATCGGACCGA ACGCGGGTGA GGTGAGAAAT CTCCTCGGAG ATTACATGTA TCTTGCACAC
ATAAGGGCTC TCCTCGACAA CATAGACGAT GTCTTTGGAA ATCCTCAGAT CCCGAGAGAA
AACTACGAAA GACTGAAGAA GAGCATAGAA GAACATATGA AGAGTATTCC GAGTGTTCTC
GACGCCTTCA AAGAAGAAGG GATCGAATTC GAATACGCAA AGGGCTGTGA AGTGACAGGG
GAAGACAGAA GCGGCTTCGA AGAGGCGATA GAAATTGCAA AGAAATCCGA CGTTGCCATC
GTTGTCGTAG GAGACAAATC TGGACTCACC CTTGATTGCA CAACCGGTGA GTCCAGAGAC
ATGGCAAACC TCAAGCTTCC AGGAGTCCAG GAAGAACTCG TCCTCGAAGT CGCAAAGACA
GGAAAACCCG TCGTTCTTGT CCTCATCACG GGAAGACCCT ACTCACTCAA AAACGTCGTC
GACAAGGTGA ACGCCATCCT TCAGGTGTGG CTTCCGGGGG AGGCGGGAGG AAGAGCGATC
GTTGACATCA TCTACGGAAA GGTGAATCCC TCTGGAAAAC TCCCGATCAG TTTCCCAAGA
AGCGCTGGTC AGATTCCTGT CTTCCACTAC GTCAAACCCT CCGGAGGAAG GTCTCACTGG
CACGGAGACT ACGTAGACGA GAGCACAAAG CCTCTTTTCC CGTTTGGGCA CGGTTTGTCT
TACACGAAGT TCGAGTACAG CAACCTCCGG ATCGAGCCGA AGGAAGTGCC ACCGGCCGGT
GAGGTGGTGA TAAAGGTGGA CGTGGAAAAC ACTGGAGACA GAGACGGAGA CGAGGTGGTT
CAGCTTTACA TCGGTCGTGA GTTTGCGAGC GTCACAAGGC CTGTGAAAGA GCTGAAGGGC
TTCAAGAGGG TTTCTTTGAA GGCGAAAGAG AAGAAGACTG TCGTGTTCAG GCTTCACATG
GACGTGCTCG CCTACTACGA CAGAGACATG AAACTCGTGG TCGAACCGGG TGAATTCAAA
GTGATGGTAG GAAGCTCTTC TGAAGACATC AGACTCACTG GTTCCTTCAC TGTGGTCGGT
GAAAAAAGAG AAGTGGTGGG AATGAGGAAA TTCTTCACGG AAGCCTGCGA GGAGTGA
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| Protein sequence | MELYRDPSQP IEVRVRDLLS RMTLEEKAAQ LGSVWGYELI DERGKFSREK AKELLKNGIG
QVTRPGGSTN LEPQEAAELV NEIQRFLVEE TRLGIPAMIH EECLTGYMGL GGTNFPQAIA
MASTWDPDLI EKMTTAIRED MRKIGAHQGL APVLDVARDP RWGRTEETFG ESPYLVARMG
VSYVKGLQGE DIKKGVVATV KHFAGYSASE GGKNWAPTNI PEREFKEVFL FPFEAAVKEA
NVLSVMNSYS EIDGVPCAAN RKLLTDILRK DWGFKGIVVS DYFAVKVLED YHRIARDKSE
AARLALEAGI DVELPKTECY QYLKDLVEKG IISEALIDEA VARVLRLKFM LGLFENPYVE
VEKAKIESHK DIALDIARKS IILLKNDGIL PLQKNKKVAL IGPNAGEVRN LLGDYMYLAH
IRALLDNIDD VFGNPQIPRE NYERLKKSIE EHMKSIPSVL DAFKEEGIEF EYAKGCEVTG
EDRSGFEEAI EIAKKSDVAI VVVGDKSGLT LDCTTGESRD MANLKLPGVQ EELVLEVAKT
GKPVVLVLIT GRPYSLKNVV DKVNAILQVW LPGEAGGRAI VDIIYGKVNP SGKLPISFPR
SAGQIPVFHY VKPSGGRSHW HGDYVDESTK PLFPFGHGLS YTKFEYSNLR IEPKEVPPAG
EVVIKVDVEN TGDRDGDEVV QLYIGREFAS VTRPVKELKG FKRVSLKAKE KKTVVFRLHM
DVLAYYDRDM KLVVEPGEFK VMVGSSSEDI RLTGSFTVVG EKREVVGMRK FFTEACEE
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