Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0844 |
Symbol | |
ID | 5170311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 859071 |
End bp | 859970 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563363 |
Product | periplasmic binding protein |
Protein accession | YP_001244439 |
Protein GI | 148269979 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTGT TCAGAAAACT GGTTTCTTTG ATTCTTCTTT TTGTCACCGC TGTTGCGCTC GCCGTAACGG TTGTGGACGA TTCTGGAAGA GTGGTGGAGA TCACATCCGC ACCCGAAAGG GTGGTCAGTC TGTCTCCCGC CGCAACGAGG TTTCTTGTGT TCCTCGGCCT GGAAGACAAA ATCGTTGGAG TCACCGATTA CGACAGCTAC GAAGCCGAAA GAGTCGGTGC GATGGTTCCT GCGAACATCG AAAAGGTGGT GAGTCTGAAT CCCGATCTCG TTCTGATGTT CGGCGGATTT CAGCTTCCCG AAGTTCCAAA ACTTGAGGAA GCAGGTTTAA AGGTCCTTGT TGTGAATCCG AATTCTCTCA ACGACATCAT CAGAGACGTG GTCCTTCTTG GAACGATCTT TGATCGTCGA GACCTTGCCC TGGAGAAATC GGAAAAGCTG AGAGAGAAAA TGCTTGAGAT AGGAAAGAAG ACCTACAACG TTCCTCCATC GAAGCGTCCC AAGGTACTCT ACCTGATCTC ATCTCCCGGT CCTGATGTGA AGGATATCTG GACGTGTGGA ATGGGATCCT ATCTCAACGA GATCATCTCT CTGGCGGGCG GGGTGAACAT TGCTTCCGGA ATCGCAGGGC CGAACGGCTG GCCACAGCTT TCTCTTGAGT ATGTTGTGTC TCAAAATCCT GATGTGATAA TAGTTGGAGT TTACATCTCT GGAACGGAGA ACGAAGAGAT AAAGAAAATA CTCAATTTTG AACCTTTCAA AGAAATAAAC GCAGTGAAGA ACAAAAGGGT CTTTGCAGTG GATGGAAACG TGGCCTCTCA ACCTTCTCCC GATGTGTTTG AACTCCTCGA TTTGTTCTAT GAATTTTTCT ACGGAGGAAA AGGTGAGTGA
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Protein sequence | MEVFRKLVSL ILLFVTAVAL AVTVVDDSGR VVEITSAPER VVSLSPAATR FLVFLGLEDK IVGVTDYDSY EAERVGAMVP ANIEKVVSLN PDLVLMFGGF QLPEVPKLEE AGLKVLVVNP NSLNDIIRDV VLLGTIFDRR DLALEKSEKL REKMLEIGKK TYNVPPSKRP KVLYLISSPG PDVKDIWTCG MGSYLNEIIS LAGGVNIASG IAGPNGWPQL SLEYVVSQNP DVIIVGVYIS GTENEEIKKI LNFEPFKEIN AVKNKRVFAV DGNVASQPSP DVFELLDLFY EFFYGGKGE
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