| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0811 |
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| Symbol | |
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| ID | 5170495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 823265 |
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| End bp | 823984 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563330 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001244406 |
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| Protein GI | 148269946 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.636434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC TTCTGGTTTT TCTTTCGATC TTTTTGACAA CAGTTTTGCT TTTTTCAATT
GATTCAAAAG TGAACTCCAA GGAGGAAAAC GGAGTGAAAC TGGTGGCGCT CACTTTCGAT
GACGGTCCTG ATGTAAAACT CACCTCCGCA GTACTGGACA CTCTTGAAAA ACACGGTGTT
GTAGCTACCT TTTTCGTTGT GGGACAGAGG TTGAACGAAA GTACTCGAGC TATCCTCGAA
AGAATGATAT CCATGGGATG TGAAATAGGA AATCACTCGT GGAATTATGA ACCACTTGAC
AAAAAAGATC CTGAGACGAT AAAAGATCAC ATCGAACGCA CGAACGAGCT TATCAAGAAA
TACGCAGGAA AAGAACCTCG ATTCTTCAGG CCACCAAACT TGGCAGTGAG CGGTACCATG
TTCGATGTGA TAAACATGCC GTTTGTGAGT GGCGTTCTCG GTTACGACTG GGCAGGATGC
GATAGAGATC CCCAAAAGAT AGTAAACAAC GTACTGAAAG GCGTAAGAGA TGGTGCAATA
ATTCTTCTTC ACGACGTACA GCCGGAGCCG CATCCGATCG TCGAAGTCCT GGAGATACTG
ATCCCAGAAT TGAAAAAACG TGGATACGAA TTCGTCACTC TGAGCGAGCT TTTCAAAAGA
AAAGGAGTGA ACCCTGAAGA TCCGGTGTAC AGAAAAAAGA TGTGGGTGTA TGTGGAATAA
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| Protein sequence | MKRLLVFLSI FLTTVLLFSI DSKVNSKEEN GVKLVALTFD DGPDVKLTSA VLDTLEKHGV
VATFFVVGQR LNESTRAILE RMISMGCEIG NHSWNYEPLD KKDPETIKDH IERTNELIKK
YAGKEPRFFR PPNLAVSGTM FDVINMPFVS GVLGYDWAGC DRDPQKIVNN VLKGVRDGAI
ILLHDVQPEP HPIVEVLEIL IPELKKRGYE FVTLSELFKR KGVNPEDPVY RKKMWVYVE
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