Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0679 |
Symbol | |
ID | 5171097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 682700 |
End bp | 683656 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640563186 |
Product | electron transport complex, RnfABCDGE type, D subunit |
Protein accession | YP_001244275 |
Protein GI | 148269815 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTGA TAAGCGCTTA CGCTCCACAC CTTCGAGAAG AGGATGATGT GAGAAAGATC ATGCTGGATG TGCTCATAGC CCTATCACCA GCGGTTATTG GGGCGGCTTA TTTCTTCGGA TGGTATGCTC TATTTCTCTG TATCGCAGGA GCGGTGATAG GTGAGCTGTT CGATATATTC GTCATGAGAT ACCTGAGAGG AGTGAAGGAT TTCGTCCCGG ATGGCAGCGG GGCAGTGACA GGACTGCTTC TGGCGATGAA CGTGAGCACA AGGCTTCCTT TCTGGGCTTT TTTGTTGGGA CTCGTTTTCG CTCTGGGGAT CGGGAAACAC GTGTTCGGAG GACTCGGCCA GAACATTTTC AACCCTGCGC TCGTCGGAAG AGCGTTTCTG CTCATTTCTT TTCCCACTTA CATGACCACC TGGGTTGTAC CCGGGGCAGG ATTCTGGAAA TCTCCAGCGG ATGTGGTAAC GGCAGCAACT CCTCTTGCAC TTTTCAAGGA ACACGGTGTT TTCACACCCT ATTGGGATCT GTTCATAGGT AAGGTTGGAG GATCCTTAGG TGAAACGAGT GCACTTCTTC TCATAATTGG TTTCATCTAT CTTCTCTTGA GAAAGAGAGT GAAGATATTC ATTCCTGTCT CCTATATAGG AACTGTTCTT GTGTTTTCTT CGATAGCTTA TTTGATGAAT CCAAGGTACG GTGATCCTCT CTTTCACCTC CTCAGTGGTG GTCTCATGCT CGGTGCACTT TTCATGGCCA CCGATATGGT GACGAGTCCC ATCACCGCGA AGGGACAGGT GATCTTCGGG ATTGGATGTG GCGTTCTCAC GATGGCTATA AGACTCTTTG GAGCGTATCC TGAAGGCGTT TCATTTTCGA TCCTTTTCAT GAATGCACTG GTTCCCCTGA TAGACAGGTA CACCAGACCG CGCATCTTCG GTGAGGTGAA AAAATGA
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Protein sequence | MKLISAYAPH LREEDDVRKI MLDVLIALSP AVIGAAYFFG WYALFLCIAG AVIGELFDIF VMRYLRGVKD FVPDGSGAVT GLLLAMNVST RLPFWAFLLG LVFALGIGKH VFGGLGQNIF NPALVGRAFL LISFPTYMTT WVVPGAGFWK SPADVVTAAT PLALFKEHGV FTPYWDLFIG KVGGSLGETS ALLLIIGFIY LLLRKRVKIF IPVSYIGTVL VFSSIAYLMN PRYGDPLFHL LSGGLMLGAL FMATDMVTSP ITAKGQVIFG IGCGVLTMAI RLFGAYPEGV SFSILFMNAL VPLIDRYTRP RIFGEVKK
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