| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0662 |
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| Symbol | |
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| ID | 5171753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 670868 |
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| End bp | 671968 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563169 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001244258 |
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| Protein GI | 148269798 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000326321 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA CCGTTACGAC TCTTGAATTG AGAGACAAAA TAACCATTGC TTCAAAAGCA
CTTGCTAAAA AATCTGTGAA ACCCATTCTT GCCGGATTCC TTTTCGAAGT GAAAGATGGA
AATTTCTACA TCTGTACGAC CGACCTTGAA ACGGGAGTCA AAGCAACCGT GAACGCCGCT
GAAATCTCCG GTGAAGCACG TTTCGTGGTA CCGGGAGACA TCATCCAAAA GTTGGTCAAA
GTTCTTCCGG ATGAAATCAC AGAACTTTCT TTAGAGGGTG ATGTTCTTGT TATAAGTTCT
GGAAGCACCG TTTTCAGAAT TACCACCATG CCCGCGGATG AATTTCCTGA GATAACACCG
GCTGAATCTG GAATAACTTT CGAGGTCGAT ATTTCGCTCC TCGAAGAGAT GGTTGAAAAG
GTCATCTTCG CTGCCGCCAA AGATGAATTT ATGCGAAATC TGAACGGAGT CTTCTGGGAA
CTCCACAAGA ATCTTCTCAG GCTGGTTGCC AGTGATGGGT TTAGACTCGC ACTTGCAGAG
GAACAGATAG AGAATGAGGA AGAGACGAGT TTCTTGCTCT CTTTGAAGAG CATGAAAGAA
GTTCAAAATG TGCTGGACAA CACAACGGAG CCGACTATAA CGGTGAGATA CGATGGAAGG
AGGGTTTCCC TGACGACAAA CGACGTGGAA ACGGTGATGA GAGTAGTCGA CGCTGAATTC
CCCGATTACA AAAGAGTAAT CCCCGAAACT TTCAAAACAA AAGTGGTGGT TTCCAGAAAG
GACCTTATGG AATCGTTGAA AAGAGTGATG GTAATCGCCA GCAAGGGAAG CGAATCTGTG
AAGTTCGAAA TAGAAGAAAA CGTCATGAGG CTCGTGAGCA AAAGTCCAGA TTATGGAGAA
GTGATCGATG AAGTTGAAGT TCAGAAAGAG GGGGAAGACC TCGTGATCGC TTTCAACCCG
AAGTTCATCG AGGATGTTTT GAAGCACATT GAGACTGAAG AAATAGAAAT GAACTTCGTG
GATTCCACCA GCCCCTGTCA GATCAATCCA CTCGACATTT CTGGATACCT CTACATAGTA
ATGCCCATCA GATTGGCGTG A
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| Protein sequence | MKITVTTLEL RDKITIASKA LAKKSVKPIL AGFLFEVKDG NFYICTTDLE TGVKATVNAA
EISGEARFVV PGDIIQKLVK VLPDEITELS LEGDVLVISS GSTVFRITTM PADEFPEITP
AESGITFEVD ISLLEEMVEK VIFAAAKDEF MRNLNGVFWE LHKNLLRLVA SDGFRLALAE
EQIENEEETS FLLSLKSMKE VQNVLDNTTE PTITVRYDGR RVSLTTNDVE TVMRVVDAEF
PDYKRVIPET FKTKVVVSRK DLMESLKRVM VIASKGSESV KFEIEENVMR LVSKSPDYGE
VIDEVEVQKE GEDLVIAFNP KFIEDVLKHI ETEEIEMNFV DSTSPCQINP LDISGYLYIV
MPIRLA
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