| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0645 |
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| Symbol | |
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| ID | 5171077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 649832 |
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| End bp | 650761 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563152 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244241 |
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| Protein GI | 148269781 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000282921 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGAAAATA AGGAGGTGAA GAGGGGGCAC TCGCCCCCTT TCCATATGAA GAGAAGAATC
GTTCCCTGGC TGATGGTCCT TCCTGTTCTC GCTCTTTTTC TTGCCATGAC GATATATCCA
TTTGGTTTCA TGATCTGGGC TTCTTTCAGG GATTACGATC TTTCAAAGAG TGCGGAGACT
CACTTCATAG GTCTCTCGAA TTACTTTCAA ATTTTCAGAG ATTCAACTGC TATTGAATCT
ATGAAATTCA CAGCAAAGCT CCTTTCGATA GCAGTCCCTA TTGAACTTGT CCTCGGTGTT
CTCATCGCTT TTCTGATAAG GGGCGTCAGG GGAGAAAAAA TAATCAGATC TTCCCTCCTC
ATTCCCATGA TGATTCCACC GGCAGTTTCC GGGGTTGCCT GGAAGATGTT GTACAACTTT
GCCTTTGGAC CGGTGAACTG GTTCCTGTCA CTATTCGGTG TCTCCAAAAT TTCTTGGCTT
GGAGATCCAT TCTATGCACA ACTGGGAATC ATTATCATAG ACGTCTGGCA GTGGACTCCT
TTCATCTTTC TCATGATATA CGCAGGTCTT CAGTCGATAC CTCAGGATCT CATCGACGCG
GCCCGGGTGG ATGGAGCCGA CTGGGGAAGA GTCTTTCTGC ACGTGGAGTT TCCTCTTCTA
AGACCTCTGA TTCTGGTCGC TCTTGTTTTG AGAATCATAG ACTGTCTGAA GACCTTTGAT
ATCGTCTTCA TGACAACCTG GGGTGGCCCA GGTTCCGCGA CCCACACCTA CAGTTTCTAC
ATCTACAAGG TGGGTATTTC CTTTGGATGG AACATCGGTT ACGCCTCTGC GTTGAGCGTT
CTGCTATTGA TTGTGGCAAT GATCCTCGTG AATATGGTGT TCAGACTCGT GAGAATGAGA
CAACAACTGG GGTTTGGGGG TGAAGAGTGA
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| Protein sequence | MENKEVKRGH SPPFHMKRRI VPWLMVLPVL ALFLAMTIYP FGFMIWASFR DYDLSKSAET
HFIGLSNYFQ IFRDSTAIES MKFTAKLLSI AVPIELVLGV LIAFLIRGVR GEKIIRSSLL
IPMMIPPAVS GVAWKMLYNF AFGPVNWFLS LFGVSKISWL GDPFYAQLGI IIIDVWQWTP
FIFLMIYAGL QSIPQDLIDA ARVDGADWGR VFLHVEFPLL RPLILVALVL RIIDCLKTFD
IVFMTTWGGP GSATHTYSFY IYKVGISFGW NIGYASALSV LLLIVAMILV NMVFRLVRMR
QQLGFGGEE
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