Gene Tpet_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0617 
Symbol 
ID5170262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp615905 
End bp616561 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content51% 
IMG OID640563124 
Productputative translaldolase 
Protein accessionYP_001244213 
Protein GI148269753 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000452349 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCT TTCTGGACAC AGCAAACTTA GAAGAGATCA AAAAAGGTGT TGAATGGGGT 
ATCGTGGATG GAGTAACGAC GAATCCAACA CTGATTTCAA AGGAAGGAGC AGAGTTCAAA 
CAGAGAGTGA AAGAGATCTG CGATCTGGTG AAAGGTCCCG TTTCTGCGGA GGTTGTGTCT 
CTCGACTACG AAGGCATGGT GAGAGAGGCG AGAGAACTTG CCCAGCTCAG TGAATACGTG 
GTGATCAAGA TACCCATGAC ACCCGATGGG ATCAGAGCGG TGAAGACACT CTCTGCCGAA 
GGCATCAAGA CGAACGTGAC TCTGGTGTTC AGCCCAGCAC AGGCCATCCT CGCCGCCAAA 
GCGGGCGCAA CCTACGTGAG TCCCTTCATC GGAAGGATGG ACGACCTCTC GAACGATGGG 
ATGAGAATGC TCGGCGAAAT AGTCGAGATC TACGACAACT ACGGATTCGA GACGGAGATC 
ATCGCCGCAA GCATCAGACA TCCAATGCAC GTGGTGGAGG CAGCCCTCAT GGGTGTAGAC 
ATCGTGACGA TGCCCTTTGC TGTGCTTGAA AAGCTCTTCA AACACCCGAT GACAGATCTC 
GGTATAGAGC GTTTCATGAA CGACTGGAAG AAGTACCTGG AGAACCTGAA GAAATAA
 
Protein sequence
MKIFLDTANL EEIKKGVEWG IVDGVTTNPT LISKEGAEFK QRVKEICDLV KGPVSAEVVS 
LDYEGMVREA RELAQLSEYV VIKIPMTPDG IRAVKTLSAE GIKTNVTLVF SPAQAILAAK 
AGATYVSPFI GRMDDLSNDG MRMLGEIVEI YDNYGFETEI IAASIRHPMH VVEAALMGVD 
IVTMPFAVLE KLFKHPMTDL GIERFMNDWK KYLENLKK