| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0596 |
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| Symbol | |
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| ID | 5170289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 593274 |
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| End bp | 593753 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640563104 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001244193 |
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| Protein GI | 148269733 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000617065 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAG TGGACCAGAT TCTTTTGAAG TTTGAAAAAC ACGCCGCCAA GATTCTCCTT
ATGGTTATGA TTGTTCTCGT TTTTGCTTCA GGAGTTGCCA GATTTCTAAA GCATCCAATA
AACTGGGCTG TTGATATGAG TAGCTTTTTC TTTGCCTGGG CCTGTTTCTT TGCGGTGGAT
GTGGCCTGGC GTGAAAACAA GATGATGTCT GTGGACATCC TTGTGAAGAA ATTTTCCGAA
AGGACTCAAA AGATCATCAG GGTAGTGAAT TACATCATTA TCCTTGCTTT CATTGTTTAT
CTTATCGTGT GGGGCTTTTA TCTTTCCTAT AAAACAAGAT ACAGAACCTT CGTGGGGATA
CCAAACTTCA GCTACACGTG GGTCACACTG AGTGTTCCTG TTGGTGCAAT TTTGCTATTC
AGAACAACTG TACTGAAGCT GATAGAAGAG TTCAGAGGCA ACAAGAAGGA GGAAAGATGA
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| Protein sequence | MKKVDQILLK FEKHAAKILL MVMIVLVFAS GVARFLKHPI NWAVDMSSFF FAWACFFAVD
VAWRENKMMS VDILVKKFSE RTQKIIRVVN YIIILAFIVY LIVWGFYLSY KTRYRTFVGI
PNFSYTWVTL SVPVGAILLF RTTVLKLIEE FRGNKKEER
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