| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0569 |
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| Symbol | |
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| ID | 5170677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 566956 |
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| End bp | 568170 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563076 |
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| Product | hypothetical protein |
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| Protein accession | YP_001244166 |
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| Protein GI | 148269706 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.883342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATAC TTAAAGAGGT TCTGAGATCA CTTCTTGCCA ACAAGATGAG AACGTTTCTA
TCGATGCTCG GTATTGTGAT CGGAGTGACC GCCGTTATCA TGGTGATGTC TCTTGGGGCA
GGTATGAAAG AAAGCGTGAC AGAGAGGCTC ACTTCGCTTG GATCGAACAT CATCATGATC
ACACCTGGAT TCACTGGAGG AAGAGGAGGT ACGATCGCTC AATCGGTGGA ATCGCTCGAG
GAAGACGATG TAGAAGATAT CCTGAAGATG TGCCCGAGTG TTGACAAAGC GATCGGTCTT
GTGAATGGAA GTTTCCTTGT TCAGTACAGA GAGACAAACA CCAGATCGAA CGTGTACTCT
GCACCAGCTG ATATTTTCCA CATTTTGAAT CTGAAAGTCT CTTCTGGAAG GACCTTCTCC
CAGGAGGACA ACACTGCCAA CGTCGCGATC ATCGGACAAG AAGTGGCGTA CAACCTGTTC
GGAAACGAAA ATCCTCTGGG CAAAAAGATT TACCTCGTTC AGGGAAATAG AAAACTCGTC
TTTGAAATCA TTGGAATCTT CGAAAGAACC GGTAGCATTC TCATGTTCAA CCCAGACAAC
ATGATTCTGA TCCCCTATGA AACGGGAAAA TTCAGGGTCT TCCAGACACA CGGAAAGGTT
TCCATGATAC TCGCAACAAG TAAATCTGCA GACGTTGCTC AAAGGGCAGT CATGGAGATA
GATCACCTGC TCTACACAAA GTTTCACGAG GAAGAAAGTT ACTACAACAT CATCAGTCAG
CAAGCCATCT TGAACGTGGT CTCTGAGAGT GTGTCTATCA TCAACCTTGT TCTCGTTGCA
ATCACCGCTG TGTCGCTGAT CGTTGGTGGT ATCGGTATCA TGAACATCAT GCTCGTCTCT
GTTGTTGAAA GAACCAGGGA AATAGGTATA AAGATGGCTA TAGGAGCATC AAGACTCAGA
ATTCTTTTGG AGTTTCTTGT GGAAAGCGTT GTGATCACAT TCGTTGCTGG TGCCATAGGT
GTTGCTCTGG GTATCTTAGG TTCGAACACG ATAGTTAACA CCTTTGGCAG TCAGTACGGA
TTGAAAGCCG TGATAGATCC GCTCTCTGTG ATTGTTGCAT TTGGAGTTTC GGCAAGCGTT
GGATTGTTCT TTGGGTTCTA TCCCGCATAC AGGGCCTCCA GACTGAGTCC AATAGAAGCC
CTGAGGTACG AGTAA
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| Protein sequence | MEILKEVLRS LLANKMRTFL SMLGIVIGVT AVIMVMSLGA GMKESVTERL TSLGSNIIMI
TPGFTGGRGG TIAQSVESLE EDDVEDILKM CPSVDKAIGL VNGSFLVQYR ETNTRSNVYS
APADIFHILN LKVSSGRTFS QEDNTANVAI IGQEVAYNLF GNENPLGKKI YLVQGNRKLV
FEIIGIFERT GSILMFNPDN MILIPYETGK FRVFQTHGKV SMILATSKSA DVAQRAVMEI
DHLLYTKFHE EESYYNIISQ QAILNVVSES VSIINLVLVA ITAVSLIVGG IGIMNIMLVS
VVERTREIGI KMAIGASRLR ILLEFLVESV VITFVAGAIG VALGILGSNT IVNTFGSQYG
LKAVIDPLSV IVAFGVSASV GLFFGFYPAY RASRLSPIEA LRYE
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