Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0550 |
Symbol | |
ID | 5170729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 547798 |
End bp | 549780 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563057 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001244147 |
Protein GI | 148269687 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000171017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TACCTGTTTT CTGGAAAATC ATGATCATAG TACTGATACT TGGCGCAGGT ATAACGTTTG TTGGCACTTT AAGTACGATA ACGATTAGAA GCAAGCTATT GGAACAAACT GATATAAACC TCCTGACACA GTCAGAAGGG AGTGCCGATG CACTGTGGAA CTTCTTACAG GCACACACAC AACTTGTGGA TTTGCTTTCC CGCGATGAGG GTGTGATCAA TCTGTACAGG GATGAAACCA ACGAAGAAGA TGTGAAAAGC TTGTTCGAGA AAGTTCTGAA GAGCTACCCA AACGTTATGA ATGTCTATGT AGGTTTGAAA GATGGAAGGA TGTATTTGGT TCCAGAGCAA GAACTTCCAG AAGGATACGA TCCAAGGGTG AGACCATGGT ACAAAGACGC AGTTGCTAAG TTAGGTAAAA TCGTCATCAC CGATCCTTAC GCGGATGCTT CAACTGGAAA AACCATCATA ACAATCGCAA AAGCGGTCCA GATCGGTCAG GAAATCGTAG GTGTTCTTGG CCTTGATTTT GACTGTTCAA AACTGGTTGA TGAGCTCTTC AAAAAAGGTG TAGAAAAGGG ATATATGAGC GCTCTTGTCG ATGAAAATGG TACTATCACT CTTCACAGCA AAAAGGATTA CATAGGCGAA AACATAAAAG ACACGGATTT CTTTAAAAAG TGGCATGCAG GATCGGAAAG CGGCGTGTTT GGATACGTGT TCGATGGTAT TCCAAGAAGA ACTGGGTACA AAAAACTACC GAACGGCTGG ATATACGCTA TCGTGGTACC AGAAGAAATC GTTTACAGCG AAGTGAAAGA ATCCACGGTG GTTCTTATAA CCATCACTCT TGTTTCTTTG GTTGCTGCAA TAGTCTTTGC GCTCTTCATG TCGAGAAGAT ATATTTCGGA ACCGCTCAAA CACCTTGCAT CTATCTCAGA TAAGATTGCT GGAGGTGATT TGACTGTCGA AATCCAGCTC AATTCAAAGG ATGAAATCGG AAAACTTGGA AATGCTCTAA CACATATGGT TAAATCCCTC AGAGAAATAG CTTTAAACAT AAAGAACAAT TCATCTGAAA TAAAACGAAA CGCAGAAAGT GTGGCTTCCG TAGCTCAGGA AGTCAGTTCA ACTATCGAGG AAGTAACATC GCAGGTGGAA AATGTAGAAT CGAACGTGAG TAACACATCG GCATCGATTC AGGAATTGAC GAGTGGGGTT GAGGAAGTAG CAGCGAGCGC TCAAAACGTT TCCAGAGCAG CTCAGGATCT CTCAGAAAAA TCTACACAGG TCAGCGAATC AGCAAAAGAA GGTGAGAAGG CCATCAAAGA AATAGTCGAG ATGATAAAAC AGGCAAGAAG CAGGGCAGAA CAAACAGCAA GTGTTGTAGA GGAGTTGAAC GAACACGCAA GGAACATAGG ACAGATACTC GATACGATCA ACTCGATAGC AGAGCAGACG AACCTTCTTG CCTTGAACGC GGCAATAGAG GCGGCGAGAG CGGGAGAAGC GGGAAGAGGA TTCGCAGTTG TGGCGGATGA AATAAGAAAA CTTGCAGAAG AGAGCAAGAG TGCGACGGAA AAAATAGGAC AGATATTGAA TCAGATCAGC CAGGAAGTGG TGAAAGCGAA CGAAGAGACG AGAGGAACGG TGCAGGCAGT GGAGAACATA AGCAGTAGAG CAGAAGTTGT AGCGAGCCAG TTTGACAGGA TAGCTCAGGG AATATCCAGC ATAGTGTCGC AAATCCAGAA TCTCGCAGCA ATAGCTGAAG AGCAGAGCGC GGCGGCTGAA GAAATGAGCA GCGCCATGGA CAACGCAAGC AGATCAATGG TAGAAGTAGC GGAGCAAATG AACGAAATCG CAGAAGCGAT GAAACAACAG GCCAAGGCTG TCAATACACT GTCCGAAGCC ATGAATAAAC TGGATCAGAT TGCAGAAAAA TTAGAAAAAG GGATGGAAGT ATTTAAATTG TAA
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Protein sequence | MKKLPVFWKI MIIVLILGAG ITFVGTLSTI TIRSKLLEQT DINLLTQSEG SADALWNFLQ AHTQLVDLLS RDEGVINLYR DETNEEDVKS LFEKVLKSYP NVMNVYVGLK DGRMYLVPEQ ELPEGYDPRV RPWYKDAVAK LGKIVITDPY ADASTGKTII TIAKAVQIGQ EIVGVLGLDF DCSKLVDELF KKGVEKGYMS ALVDENGTIT LHSKKDYIGE NIKDTDFFKK WHAGSESGVF GYVFDGIPRR TGYKKLPNGW IYAIVVPEEI VYSEVKESTV VLITITLVSL VAAIVFALFM SRRYISEPLK HLASISDKIA GGDLTVEIQL NSKDEIGKLG NALTHMVKSL REIALNIKNN SSEIKRNAES VASVAQEVSS TIEEVTSQVE NVESNVSNTS ASIQELTSGV EEVAASAQNV SRAAQDLSEK STQVSESAKE GEKAIKEIVE MIKQARSRAE QTASVVEELN EHARNIGQIL DTINSIAEQT NLLALNAAIE AARAGEAGRG FAVVADEIRK LAEESKSATE KIGQILNQIS QEVVKANEET RGTVQAVENI SSRAEVVASQ FDRIAQGISS IVSQIQNLAA IAEEQSAAAE EMSSAMDNAS RSMVEVAEQM NEIAEAMKQQ AKAVNTLSEA MNKLDQIAEK LEKGMEVFKL
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