Gene Tpet_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0524 
Symbol 
ID5170265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp518455 
End bp518913 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content49% 
IMG OID640563032 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001244122 
Protein GI148269662 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.27641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGATAG CGGTGAGAAG AATACTTATC AGGGAAGAGT ACTGCATGGG ATGTAAGCTG 
TGTGAGATAA ACTGCGTCGC TGCACAGGTG GGAACGGGAA ACCTCATAAA GGTGTACAGA 
TACGTCCCGG AACTTCCCGA ACCAAACGTG ATAGTGGAAG AGCACGATTA CGTCACTTTC 
GCACTTCAGT GCAGAAACTG TGATGATCCA TCCTGTCTGA AGGCCTGTAT GACGGGCGCG 
ATGCACAGAG ATCCAAAAAC AGGAGCCATC AGAGTGAATC AAGAAAAGTG TGTAGGATGC 
TGGATGTGTG TGATGGCCTG TCCCTTCGGT GTGATAAGAA GGAACACGAA AGAAAAGAAA 
GTTGCCTCAA AGTGTGATCT CTGTGCCGAT AGAGGAACTC CTGGCTGTGT CGAAGGCTGT 
CCAAACGAAG CGCTCGTTCT GGTTGAGGTG AGAGAATGA
 
Protein sequence
MVIAVRRILI REEYCMGCKL CEINCVAAQV GTGNLIKVYR YVPELPEPNV IVEEHDYVTF 
ALQCRNCDDP SCLKACMTGA MHRDPKTGAI RVNQEKCVGC WMCVMACPFG VIRRNTKEKK 
VASKCDLCAD RGTPGCVEGC PNEALVLVEV RE