Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0521 |
Symbol | |
ID | 5170560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 514734 |
End bp | 515405 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563028 |
Product | two component transcriptional regulator |
Protein accession | YP_001244119 |
Protein GI | 148269659 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.720367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAGTTC TTGTGGTAGA AGACGAAAGA GATCTCGCCG ATCTGATAGC CGAGGCTTTA AAGAAAGAAA TGTTCACCGT CGATGTTTGT TACGATGGAG AAGAGGGTAT GTACATGGCT CTGAACGAAC CTTTCGATGT TGTGATTCTT GATATAATGC TTCCCGTCCA CGATGGGTGG GAGATCCTGA AGTCTATGAG GGAAAACGGA GTGAACACCC CCGTTTTGAT GCTCACAGCT CTTTCAGATG TAGAGTACCG TGTGAAGGGT CTCAACATGG GGGCGGACGA TTACCTTCCC AAACCTTTCG ATCTCAGAGA GCTCATAGCC AGGGTGAGAG CTCTCATCAG AAGAAAAAGC GAAAGCAAAA GCACAAAACT CGTGTGCGGT GACTTGATTT TGGATACAGC CACTAAAAAG GCATACAGGG GCGGTAAAGA AATAGATTTG ACAAAGAAGG AGTACCAAAT TTTGGAATAC CTTGTGATGA ACAAAAACAG AGTTGTCACA AAGGAGGAGC TCCAGGAACA CCTGTGGAGC TTCGATGATG AAGTTTTCTC CGATGTTTTG AGAAGTCATA TAAAGAATTT GAGGAAGAAA GTGGACAAAG GGTTTAAAAG GAAAATAATT CACACGGTGA GAGGTATCGG TTATGTTGCC CGTGACGAAT GA
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Protein sequence | MRVLVVEDER DLADLIAEAL KKEMFTVDVC YDGEEGMYMA LNEPFDVVIL DIMLPVHDGW EILKSMRENG VNTPVLMLTA LSDVEYRVKG LNMGADDYLP KPFDLRELIA RVRALIRRKS ESKSTKLVCG DLILDTATKK AYRGGKEIDL TKKEYQILEY LVMNKNRVVT KEELQEHLWS FDDEVFSDVL RSHIKNLRKK VDKGFKRKII HTVRGIGYVA RDE
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