Gene Tpet_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0481 
Symbol 
ID5170332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp473977 
End bp474621 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content41% 
IMG OID640562990 
ProductGntR family transcriptional regulator 
Protein accessionYP_001244081 
Protein GI148269621 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCGAAGTGGA CCTCGTGAGA ACGAAGGTCT ACAATCTTCT CAAAGAAATG 
ATACTGAACC ACGAATTGAA GCTTGGAGAG AAACTAAACG TGAGAGAACT CTCCGAAAAA 
CTTGGTATCA GCTTTACTCC TGTGCGGGAT GCCCTTCTCC AGCTTGCAAC TGAGGGTCTT 
GTGAAGGTGG TTCCAAGGGT TGGTTTTTTT GTAACCGACG TCGATGAGAA ATTCATAAGA 
GAAACCATAG AAACGAGAAT CATGATGGAA GTCTTCTGTC TTGAAAATTA CTTCGATAAA 
ATTGCTGGTT CCGAAGAACT TTTAGAGATA AAGGGAGAAA TCGATGATGT GGAGAAAAGC 
GCCAAGAGAG AGATTTTTGA CGATTCCGAT GAAAGGCTAC ACAAACTCTT CATCAGAGCC 
TCGGGAAATG AACTCATCAT ATCTTTGTAT GAAAAAATAT GGGATCGTAT AGACCTCGTA 
AGGCATCTGA ACGAAAGATA CGTCGTTTCG AACAGGGAAC ACAAAGAACT CATAGAGAGA 
ATCATCAGCG GCGATAAAGA AGGCGCTATT GAAAAGTTAA AAGAACACTT GAAAAATGTG 
GAGGCGGAGA CCATAAAGAA CCTGTACACA TATGAAAGGA GTTGA
 
Protein sequence
MKKIEVDLVR TKVYNLLKEM ILNHELKLGE KLNVRELSEK LGISFTPVRD ALLQLATEGL 
VKVVPRVGFF VTDVDEKFIR ETIETRIMME VFCLENYFDK IAGSEELLEI KGEIDDVEKS 
AKREIFDDSD ERLHKLFIRA SGNELIISLY EKIWDRIDLV RHLNERYVVS NREHKELIER 
IISGDKEGAI EKLKEHLKNV EAETIKNLYT YERS