| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0479 |
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| Symbol | |
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| ID | 5170837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 471761 |
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| End bp | 472519 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640562988 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001244079 |
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| Protein GI | 148269619 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCGATC TCAGGGGGAG GGTTGCCCTC GTAACCGGTG GCTCTCGTGG GCTGGGTTTT
GGAATCGCTC AGGGGCTGGC AGAGGTTGGA TGTTCAGTGG TCGTTGCAAG CAGAAATCTG
GAGGAAGCAT CAGAAGCGGC TCAAAAGTTG ACAGAAAAAT ACGGCGTTGA AACGATGGCT
TTCCGATGCG ATGTTTCAAA CTATGAGGAA GTGAAAAAAC TTTTGGAAGC AGTGAAAGAG
AAATTTGGAA AGCTCGATAC GGTGGTCAAC GCTGCGGGGA TAAACAGAAG ACATCCAGCG
GAAGAATTTC CTCTCGATGA GTTCAGACAG GTGATAGAGG TGAACCTTTT TGGAACTTAC
TACGTGTGTA GGGAGGCCTT TTCACTCCTG AGAGAATCCG ATAACCCCTC TATCATAAAC
ATAGGATCTC TCACCGTTGA AGAAGTCACC ATGCCCAACA TATCCGCGTA CGCTGCTTCG
AAAGGGGGCG TAGCTTCTCT CACAAAAGCT CTGGCGAAGG AGTGGGGAAG GTACGGCATA
AGGGTGAATG TGATAGCGCC GGGCTGGTAC AGAACCAAGA TGACAGAGGC TGTATTCAGC
GATCCAGAAA AACTGGACTA CATGCTCAAG AGGATACCCC TTGGCAGAAC GGGTGTACCA
GAGGATTTGA AGGGTGTGGC AGTCTTCCTT GCTTCCGAAG AGGCGAAGTA CGTGACTGGA
CAGATCATAT TTGTAGACGG TGGTTGGACT GCGAATTGA
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| Protein sequence | MFDLRGRVAL VTGGSRGLGF GIAQGLAEVG CSVVVASRNL EEASEAAQKL TEKYGVETMA
FRCDVSNYEE VKKLLEAVKE KFGKLDTVVN AAGINRRHPA EEFPLDEFRQ VIEVNLFGTY
YVCREAFSLL RESDNPSIIN IGSLTVEEVT MPNISAYAAS KGGVASLTKA LAKEWGRYGI
RVNVIAPGWY RTKMTEAVFS DPEKLDYMLK RIPLGRTGVP EDLKGVAVFL ASEEAKYVTG
QIIFVDGGWT AN
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