Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0471 |
Symbol | thyX |
ID | 5170438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 461888 |
End bp | 462550 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640562980 |
Product | FAD-dependent thymidylate synthase |
Protein accession | YP_001244071 |
Protein GI | 148269611 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000151559 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCG ATATCTTGGA CAAAGGATTC GTTGAACTTG TGGATGTGAT GGGAAACGAC CTCTCCGCTG TACGGGCTGC CCGCGTTTCT TTCGATATGG GTTTGAAAGA CGAAGAAAGG GATAGACATC TCATCGAATA CCTCATGAAA CATGGTCACG AGACACCTTT CGAACACATT GTCTTCACTT TCCACGTGAA AGCTCCCATA TTCGTGGCGA GGCAGTGGTT CAGACACAGG ATCGCATCCT ACAACGAATT GAGCGGCAGA TACTCGAAGC TCTCCTACGA ATTTTATATC CCCTCTCCCG AACGCCTGGA AGGGTACAAA ACGACCATCC CTCCCGAACA GGTGACGGAG AAGATCTCAG AAATAGTCGA TAAAGCGTAT CGAACGTATC TGGAGTTGAT AGAAAGCGGT GTTCCTCGAG AAGTGGCAAG GATAGTGCTC CCTTTGAATC TGTACACGAG GTTTTTCTGG ACTGTGAATG CAAGAAGTCT CATGAACTTT TTGAACCTGA GGGCAGATTC TCACGCTCAG TGGGAAATTC AACAGTACGC TCTGGCAATC GCGAGAATTT TCAAAGAGAA GTGTCCCTGG ACTTTTGAGG CATTTCTCAA GTATGCTTAT AAAGGAGATA TCCTGAAGGA GGTACAGGTA TGA
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Protein sequence | MKIDILDKGF VELVDVMGND LSAVRAARVS FDMGLKDEER DRHLIEYLMK HGHETPFEHI VFTFHVKAPI FVARQWFRHR IASYNELSGR YSKLSYEFYI PSPERLEGYK TTIPPEQVTE KISEIVDKAY RTYLELIESG VPREVARIVL PLNLYTRFFW TVNARSLMNF LNLRADSHAQ WEIQQYALAI ARIFKEKCPW TFEAFLKYAY KGDILKEVQV
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