| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0438 |
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| Symbol | |
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| ID | 5170934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 420106 |
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| End bp | 424353 |
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| Gene Length | 4248 bp |
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| Protein Length | 1415 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562938 |
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| Product | putative CoA-substrate-specific enzyme activase |
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| Protein accession | YP_001244038 |
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| Protein GI | 148269578 |
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| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
[COG3580] Uncharacterized protein conserved in bacteria
[COG3581] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGTG TGTGCATCGG TTCCTCGAGT GTTTCATTCT GCGGTGAAAG GGAGAAAGGA
AATCTCCCTC ACAACGGAGA TCCCCTCGCT CTGCTTTCCA TGATGGTCCC CGCCTTTCTC
GATGAAGGAC CCGTGGTCAT CACAGGTCGA AAGACAAGGG AAATAATAGA TCTGCCTCAG
ATATCCGAAG CGGAGGCAAC GGAAATCGCC TACAGGCATC TCATGAAAAA ATACGGAAAG
GTCGAAGCCG TTGTCAGCGC CGGTGGGGAG AACACCATTC TCTACAGGGT GAACGATAAA
GGAATCATAA CCGGTATATA CACGGGTAGC AAGTGTGCCT CGGGAACGGG TGAGTTCTTC
CTTCAGCAGC TTCAGAGGAT GGGAATATCT CTTGAGGAAG CAAACGGTGT CGAAGTGGAA
GACTACTACG AACTCTCCTC GAGGTGTACC GTTTTCTGCA AGAGCGATTG TACCCACGCA
CTGAACAAAG GAGTTCCAAA GGAACTCGTT CTGAACGGAC TTGGAAAGGT GATGGCCGAC
AAGATAGTGG AACTGGCCCA CAAGGCAGGA GTGAAGAAGA TCCTCCTTGT CGGTGGAACG
ACGAGAAACA AGCTCATGCT GAAGCACCTG AAAAAGGTTC TGGAAGTGAT CGTTCCGGAA
GAAGCGCTGT TCTTCGAGGC TTATGGGGCT TACCTGTGGG GAAAACTGAA CAGAGTGGTA
TCGAAAAAGA CCTTCGTAAT CAAAAAAGAG AAGATGACCA GTTTTCCCAC TCATGAACCT
CTCAAAAAGT ACCTCCACAT GGTCGAGTTC AAGGAGATGC CGTTTCAAGA GGTAAGGGAT
GGAGATGTGT GCGTGCTGGG GATAGACGTT GGATCCACCA CAACGAAAGC AGTGCTGATG
AGATACGATG ATGAAGCCAT CCTGGCGGGA GTGTACCTTC GAACTCTGGG AGATCCCATA
AGAGCGGCGC GGCAATGCTA CTCCTCTATT TTGGAACAGC TCAACGGGAC GAAAGTGAAG
ATAATCGGAC TCGGTGTGAC AGGATCAGGG AGGAAGATCG TTGGGCTGTA TTCTCAGACC
GACGCTGTGT ACAACGAGAT AATGGCACAC GCGAAGGCGG CTGCTCGTTT CGATCCAGAG
GTGGACACGA TCTTCGAGAT AGGTGGCCAA GATGCCAAGT ACACCTATCT GGTGAACGGT
GTTCCGGCGG ATTACGCGAT GAACGAAGCC TGTTCGGCCG GGACGGGATC CTTCCTCGAA
GAGGCAGCGG GAGAGTCACT TGGAGTCCAC TACACCGAGA TCGGTGATCT CGCTCTGAGA
GGTGAAAATC CACCGAACTT CAGCGATCAG TGCGCAGCCT TCATTGGTAG TGACGTCAAA
ACGGCGGTGA ACGAAGGGAT CTCTAAAGAA GACATATGTG CCGGACTTGT GTACTCCGTG
TGTATGAACT ATTTGAACAG GGTGAAAGGA AGCCGGCCCG TAGGAAAGAA GATCTTCATG
CAGGGTGGAG TTTGCTACAA CAAAGCGGTG CCTGTTGCCA TGGCTGCCCT CGTTGGGAAA
AACATAGTCG TTCCCCCGCA CCCGGGTTTG ATGGGTGCGT ATGGAGTGGC TCTGCTCACC
AAAGAGAATC TTGAACTCGG TTTTCTGGAA AAGAAAGAGT TCAAACTGAA GGAATTGATC
TCCAGAGAAG TCAGATACAG AGGAACGTTC ATCTGCCCTG GTGGAAAAGA AAAATGTGAT
AGAAAGTGTG AGATCAGGAT CATAGAGATC GATGGAAAAC GGTTCCCGTT CGGTGGTGCC
TGCAACAAGT ACGAGAACGT GCTGAGACAT ACCAGCGTAG ACAGCACGAA GTACAATTTC
GTCAAAAACA GGGAGAAATA CATATTACAC TTCGAGAGTG AAGTGAAGGG GACAAAGACC
ATCGGTTTGA GCAGATCTTT GGCGATGAAC AACCTTTTCC CGCTTTTCTA CACCTTCCTT
ACAGAACTCG GTTTCGACGT TGTGGTTCCC GAAAAGTCCG ACAGACGCGG CTGGGAGATG
ATGAACTCCG AATTCTGCTT CCCGGTGGAA CTCTCCCATG GCTACATGTA CGATCTGATC
TCGAAGAATC CCGATTTGAT ATTCGTTCCA AGACTGAGAG GTATCAGAGT GGAAAATTCG
GAGAACTACA ATGTCTTCTG TCCCTTTGTT CAGAGCGAGG CTGATTGGCT CACATCCGCG
TTTCCCGAAC TGGAAGAAAA GCTCGTGACG GGCTATTTCG ATTTCTCGCG CGGTGATGAG
AAGGAAGAAT TTCTCAGAGT GGCCGAAAGG CTTGGAAGGT CACGCGAAGA AGGAGAAAGG
GCCTTTGAAA AGGCCTGGAA GATTTTCAAC GAAAGGTTCA ATCTCATAAA GAAACAATGG
AATGAATTCT TGAAAGTTCT TGACGAATCG GAATTCGGAG TTGTTCTCTT CGGAAGATCT
TACAACGCCT TTTCTTCTGA TGCGAACATG GGAGTCCCCG AAAAATTTGC CACTCGCGGA
ATTCCCATCA TCAACTTCGA TTCCATACCC TTCGAGGATG AAAAGGGCTA CAGAAACATG
TACTGGTCAT GGGGAGAGAT GATTCTAAAA GCGTCACGAT TCGTCGAAAA GCACCCAAAA
CTCTTTGGAG TTTACATCAC CAACTTCAGT TGTGGTCCTG ATTCCTTCAT CATCTCTTAC
TTCAGAGACA TAATGGCAAA GAAACCGTCG CTTGTGCTGG AGCTTGACAG TCACACGGCG
GACGCGGGCA TAGAAACAAG AATCGAAGCT TTCATAGACA TTGTGAAGAG TTACCTCAAG
TTGCAGAGAG GGAACGAGGA AAGAAAGAGT GCAGAAAGGC CCCGGACGGT GCTGGAGAAA
AACACCCTCT ATGTGATCAC CCCGGACGGA GAGAGACTAA GACTCAACGA TGAAAGGGTG
AAAGTTGTTT TCCCGTCGAT GGGCCAATTC GGGTCTCAGT GTCTCTCCGC GGCTTTCAGA
TACTACGGTG TCAAATCCGA CGTGTGTCCT CCACCGGACG TTGAGGAGTT CAAACTCGGT
AGGGGGAACT CTCTTTCAAA AGAGTGTCTC CCTCTTCATC TCACTCTTGG GAGTCTCATA
AAGTACATCA GAGAGAAGGT AACCGATGAC GAGATCGTGC TTTATTTCAT GCCGGAGACG
ATGGGACCGT GCCGTTTTGG ACAGTACAAT GTCTTCATGA ATCTGTGGCT TGACAGGAAC
AACGTAAGGA ACGTGACGCT CTTCGGGTTG AATTCCGAAA ACGCCTACGC GGGGCTTGGT
ATCGCTTTCA GAATCAGGGC ATGGTTGGCG GTTGTTGTTT CTGACGTGTT CTTCGACGTG
GAACGCGCCG TGATGACACT GGCAAGGGAC AAAGAAGAAG CGAGAAAAGT CCTGGAAGGA
TGCAGGGAAA AGATATTGAT CAGCCTTGCG AATGATTCCC TCAGGGACTT TTTCAAAACA
CTCGATGAAG TCTCAAAGAT ACTTTCGGGT GTTGAGATGA TCATGGATTA CGAGAAAGCG
CCGAAGGTTC TCCTAACAGG AGAAATCTAT GTGAGAAGGG ACGAGTTCTC CAGGAAATAC
CTCGAAAACC TGATGGAGAG GAACGGCATC ATCATGCACA TATCGCCGGT TCACGAGTGG
ATCTATTACA CGGATTATCT GTACCTCAAC AGGTTGATCT CTCCGAATTC TACCCGAGTA
GACAGACTGA AGAAACGAAT CGAGATCCTC GTGAAAAGGT ACATAGAGAA AAGAGTGAAA
AAAACCTTGG AGAAGAGTGG TTTTTACAGG GCTCGGATGG TGGATGTGGA AGCCATCGTT
GAATCGGCGA AAGACTATCT CAATCCGAAA CTCACCGGAG AAGCGATCCT CACCATAGGA
ACTGTACTTC ATGAAATCGT GAACCACTAC GATGGTATCA TCTCCATAGG ACCATTTGGT
TGCATGCCGA GCAGGATAGC GGAAGCAATC GTGAAGAGAG GCTTGAAAGA ACAAAAAAGA
GAGACCACAG GAGTTTTGAG AAAAGTGCTG GACGAGTTCG GAGACCTTCC CGTGATACAC
ATAGAGTCCG ATGGGAATCC GTTCACACCA ACGGTACAGA GCAAGCTGGA GGCGTTCATG
TTCCAGGTCA GAAGATTGAG AAACTACCTG AACGGTCTGC TGAACACGGA GAACACCCTG
GAGGAAACTG AAGAGACTCT CCCTGAAAAT ATCAGGGTTG ATTCATGA
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| Protein sequence | MTGVCIGSSS VSFCGEREKG NLPHNGDPLA LLSMMVPAFL DEGPVVITGR KTREIIDLPQ
ISEAEATEIA YRHLMKKYGK VEAVVSAGGE NTILYRVNDK GIITGIYTGS KCASGTGEFF
LQQLQRMGIS LEEANGVEVE DYYELSSRCT VFCKSDCTHA LNKGVPKELV LNGLGKVMAD
KIVELAHKAG VKKILLVGGT TRNKLMLKHL KKVLEVIVPE EALFFEAYGA YLWGKLNRVV
SKKTFVIKKE KMTSFPTHEP LKKYLHMVEF KEMPFQEVRD GDVCVLGIDV GSTTTKAVLM
RYDDEAILAG VYLRTLGDPI RAARQCYSSI LEQLNGTKVK IIGLGVTGSG RKIVGLYSQT
DAVYNEIMAH AKAAARFDPE VDTIFEIGGQ DAKYTYLVNG VPADYAMNEA CSAGTGSFLE
EAAGESLGVH YTEIGDLALR GENPPNFSDQ CAAFIGSDVK TAVNEGISKE DICAGLVYSV
CMNYLNRVKG SRPVGKKIFM QGGVCYNKAV PVAMAALVGK NIVVPPHPGL MGAYGVALLT
KENLELGFLE KKEFKLKELI SREVRYRGTF ICPGGKEKCD RKCEIRIIEI DGKRFPFGGA
CNKYENVLRH TSVDSTKYNF VKNREKYILH FESEVKGTKT IGLSRSLAMN NLFPLFYTFL
TELGFDVVVP EKSDRRGWEM MNSEFCFPVE LSHGYMYDLI SKNPDLIFVP RLRGIRVENS
ENYNVFCPFV QSEADWLTSA FPELEEKLVT GYFDFSRGDE KEEFLRVAER LGRSREEGER
AFEKAWKIFN ERFNLIKKQW NEFLKVLDES EFGVVLFGRS YNAFSSDANM GVPEKFATRG
IPIINFDSIP FEDEKGYRNM YWSWGEMILK ASRFVEKHPK LFGVYITNFS CGPDSFIISY
FRDIMAKKPS LVLELDSHTA DAGIETRIEA FIDIVKSYLK LQRGNEERKS AERPRTVLEK
NTLYVITPDG ERLRLNDERV KVVFPSMGQF GSQCLSAAFR YYGVKSDVCP PPDVEEFKLG
RGNSLSKECL PLHLTLGSLI KYIREKVTDD EIVLYFMPET MGPCRFGQYN VFMNLWLDRN
NVRNVTLFGL NSENAYAGLG IAFRIRAWLA VVVSDVFFDV ERAVMTLARD KEEARKVLEG
CREKILISLA NDSLRDFFKT LDEVSKILSG VEMIMDYEKA PKVLLTGEIY VRRDEFSRKY
LENLMERNGI IMHISPVHEW IYYTDYLYLN RLISPNSTRV DRLKKRIEIL VKRYIEKRVK
KTLEKSGFYR ARMVDVEAIV ESAKDYLNPK LTGEAILTIG TVLHEIVNHY DGIISIGPFG
CMPSRIAEAI VKRGLKEQKR ETTGVLRKVL DEFGDLPVIH IESDGNPFTP TVQSKLEAFM
FQVRRLRNYL NGLLNTENTL EETEETLPEN IRVDS
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