Gene Tpet_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0412 
Symbol 
ID5170281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp397944 
End bp398462 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content47% 
IMG OID640562911 
Productiron dependent repressor 
Protein accessionYP_001244012 
Protein GI148269552 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000351504 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAG GAAGAAAGAA AACCCTGACA CCTGCGCTCG AAGATTACCT TGCGGTGATT 
CAGGAGATAC TTCAGAAACA ACCCGCGGCG AGGGTGAGCA CCATCGCGAG AAAGATGGGT 
GTGAGCCTTC CAAGTGTGAC AAACGCCATG AAGAGGCTGG CGGAACTTGG ATACGTCGAA 
TACGAGAAGT ACGGATACAT AACCCTTACC GAGAAGGGAA AAAGAAGAGC AAGATCGTTG 
AGAGGTTCTC AGAACAGACT CAGAAACTTT TTCTTCTACG TGATGGGAAT ACCTTCGCCC 
ACCGCGGAAA AACTCGCGCG TCATTTCTCA CACTTCCTGG ATACAAAAAC GAGAGAAAGA 
TTCAAGAGAT TTTACGACAT AATGGTGAAT TTCGATGAGA GCAAGGTGCA GGAACTGAAG 
GAATTCCTCG AAGAGAGCAG AAGACTTGTG AACGTTCAGG AAATCCCTGA AGAAGCCAGA 
ATTATGGAAG AAGATGAAGA AGAGGAGGCT CAACCATGA
 
Protein sequence
MPRGRKKTLT PALEDYLAVI QEILQKQPAA RVSTIARKMG VSLPSVTNAM KRLAELGYVE 
YEKYGYITLT EKGKRRARSL RGSQNRLRNF FFYVMGIPSP TAEKLARHFS HFLDTKTRER 
FKRFYDIMVN FDESKVQELK EFLEESRRLV NVQEIPEEAR IMEEDEEEEA QP