| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0395 |
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| Symbol | |
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| ID | 5171020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 383901 |
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| End bp | 384173 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640562896 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001243997 |
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| Protein GI | 148269537 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000648221 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCGGAGA AGTTTAACCT TCAGGACAGG TTTCTGAATC ATCTCAGGGT TAACAAGATC
GAAGTGAAGG TGTATCTGGT GAACGGTTTT CAGACAAAGG GATTCATCAG ATCTTTTGAC
AGCTACACGG TCTTGCTGGA GAGCGGAAAC CAACAGAGTC TCATCTACAA ACACGCGATC
AGCACGATCA TTCCTTCTTC TTATGTGATG CTGATGCCGA GAAAACAGGA AACAGCACAG
GAGGCTGAGA CCTCTGAAAA CGAGGGATCT TGA
|
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| Protein sequence | MAEKFNLQDR FLNHLRVNKI EVKVYLVNGF QTKGFIRSFD SYTVLLESGN QQSLIYKHAI
STIIPSSYVM LMPRKQETAQ EAETSENEGS
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