Gene Tpet_0391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0391 
Symbol 
ID5170754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp380334 
End bp381503 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content49% 
IMG OID640562892 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001243993 
Protein GI148269533 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTA TCGAAGTGCT GAGTCTGAGA AAGTATTTCC CGATCAGAAA AGGATTTCTT 
GTGAAAAAGA TCGTTGGTTA CGTGAAAGCG GTCGATGATA TCTCTTTTTC CGTGGAAAAG 
GGAAAAACGT TCGCCCTCGT TGGCGAGTCG GGATGTGGGA AGACAACGAC CGCAAAGACG 
ATCCTGCGCC TCACGAATCC CACCGCGGGC CGTGTTGTGA TCGACGGTGA CGACACAACA 
TACTACTTCA TGAAGAGAAA AGATGCGGAG AACTACCTGA AAACGACCTA CGTGGGTATA 
TTCCGCGAAA TGAGGGAAAA ACTCTCACCG GATCAGATTG TGGACGTGCT CGAGGATGTG 
GATAAGAAGT ACGCGGAGAT CTTCTTTAAA GAAGCGAAAG AAAGCGAAGA GAAGTTCTAT 
AATATCCTGC TTGATAACAT CGATGAAAAG AGGATGAAAT TCAGAAGGAA GATACAGATC 
GTCTTTCAGG ATCCCATGAG TTCCTTGAAC CCGAGAATGA CGGTTGGCGA CATCCTCACT 
GAGCCCATTC TGTTCCACGG ACTGGCGAAA ACACGAGAAG AAGCCGTAGA TATGGCAAAA 
GATCTTCTCA AAAGCGTGGG GCTCAAGGAA TATCACCTCG AAAGATATCC CCATCAGTTC 
AGTGGAGGCC AGAGACAGAG GATCGCTATC GCAAGGGCGA TCTCCATAAA CCCCGAGATA 
GTGATACTCG ACGAACCCAC GGCTTCACTG GACGTTTCCG TTCAGGCACA GGTTATAAAC 
CTGTTTCTCA AACTGCAGGA AGAGAAAGGT TTTACGTATC TCTTCATCTC GCACGACCTT 
GGACTTGTGA GATTTATAAG CCACGAGGTC GGCATCATGT ACCTCGGCAG GATCGTGGAG 
ATGGGAAACA CCGATGAGAT ATTCGACAAT CCCCTTCATC CGTACACCCA AGCCCTGCTT 
TCTGCTGTTC CCGTGCCGGA TCCGAAGGTT GAGCGCACAA GAAAGCGTAT CATTCTCAGG 
GGTGGGGTTC CAAGCCCGAT CAACAGGCCG ACTGGCTGCT TCTTCCATCC GAGGTGTCCT 
TACAAGATGC CCGTGTGTGA GAAAGAGTAT CCGGTGATGA AGGAAATTTC CCCAGGTCAC 
TGGGTGGCGT GTCATTTACA TTCGTCATAG
 
Protein sequence
MKSIEVLSLR KYFPIRKGFL VKKIVGYVKA VDDISFSVEK GKTFALVGES GCGKTTTAKT 
ILRLTNPTAG RVVIDGDDTT YYFMKRKDAE NYLKTTYVGI FREMREKLSP DQIVDVLEDV 
DKKYAEIFFK EAKESEEKFY NILLDNIDEK RMKFRRKIQI VFQDPMSSLN PRMTVGDILT 
EPILFHGLAK TREEAVDMAK DLLKSVGLKE YHLERYPHQF SGGQRQRIAI ARAISINPEI 
VILDEPTASL DVSVQAQVIN LFLKLQEEKG FTYLFISHDL GLVRFISHEV GIMYLGRIVE 
MGNTDEIFDN PLHPYTQALL SAVPVPDPKV ERTRKRIILR GGVPSPINRP TGCFFHPRCP 
YKMPVCEKEY PVMKEISPGH WVACHLHSS