| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0355 |
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| Symbol | |
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| ID | 5170207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 338170 |
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| End bp | 339549 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640562859 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001243960 |
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| Protein GI | 148269500 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000720237 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGG CCTATCTCTT TCTCACACTC GAAGGTGTCT TCTCTCTGTT CTACGCGCTT
CTAATACAGG GACCTGTGTT CACAGGTCTT GCGATGCTTT TCAATCTGGA CGAGTTTCTC
CTGAGTGTCG CCGCTGCAAT CCCTCCCATG ATGCAGTTTT TTCAGCTGTT TGCCTCTTTC
TTTGTTCAGA AATACAGAAA GAGGCGTTTT CTGGTCAACG TGTTCAACGC TTTCAGCAGA
TTCAGTTTCG CTTTTCTCAT CGTTTTTCTA CTGCTTGGGA AAACAGAACC GTTGATTTTC
ATCGTTGCGC TCGTGATTTC CCAGATCTTC GCGGCCCTCT CCAGCAGTAC GTGGAACTCA
TGGATGAGAG ATCTCGTTCC TCCAGAGGAA AGAGGAAGGG TGTTTGGAAA CAGAAACATG
TTTCTATCCA TAGGAAATGC TCTCATTATA TACCTCTATT CTTCTATAGT TGATCATTTC
TCTTCGGGTT TTGTTCTTGT GCTTCTCATA TCCACAGTGG GAACCGTCCT TTCTATCTTT
GCCATGAACA AAATACCGGA CGTTCCTGTT AGGGAAACAG TAACGGGAAT TCCTCTCAAA
GCGGTGTTCA AGGACGAAAA CTTTATGAAG TTTGTCTTCT TCACCTTTTA CTGGAACATG
GCGGTCACGT TCTCTTCTGC TTTCTATCAC TATCATCTTT TGAAGAACCT GGGTGTGGAT
TACACGTACA TCGCTTACAT GATGATCGTG AACAACTTTG TGGCGATGCT GGTTTACAGG
ATCCTTGGAA AAGTGTCTGA CAGGGTAGGA CACAAAACGA TAGCCGAGTT CGGTATCATC
CTTGCTTCTT TTGTCTCCGG TATGTGGTTT TTCATGAACA CCAATACTTA CAGAACCCTG
ATGGTAGCGG ACGCCTTCCT TTCTTCCATC GCGTGGTCCG CTATAAACCT GTCACTCGCC
ATCCTTCCTA TGGAGGTTGC TTTCGAGTCT GATCCCGTTT TCTTCGGTTT GAACGCGTCT
TTTGCCAGCG CTGGAAGTCT TATAGGCTCA TTTGCAGGTG GAATCACGGC GAAATTTCTC
TCTGATATTT ACGTAAATCT CCACGGTTTC GAAATTTTTG GACTTCAACT GCTCTTTTTG
ATGGCAGGAA TCTTCAGATT CTCCGCTGTG TTCTTTTTGA GAAAAGTCAA GGTGAAGAAG
CACATCCCGT TCAAAGCCTT CATGTTGAGT ACCCTTTCTG TCACTCTGAG ACGTCCCATA
GACAGAATGC TCGATGTGTA TCTACTTTTG AAAAGGGGGA ATGAACGTGT ACGAGAGCTT
GTTGGAAGAT CTAAGAGAAG GGAGAGTAAT ACTGACGAGC AAGGCGGGAA ACAAGGTTAA
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| Protein sequence | MKKAYLFLTL EGVFSLFYAL LIQGPVFTGL AMLFNLDEFL LSVAAAIPPM MQFFQLFASF
FVQKYRKRRF LVNVFNAFSR FSFAFLIVFL LLGKTEPLIF IVALVISQIF AALSSSTWNS
WMRDLVPPEE RGRVFGNRNM FLSIGNALII YLYSSIVDHF SSGFVLVLLI STVGTVLSIF
AMNKIPDVPV RETVTGIPLK AVFKDENFMK FVFFTFYWNM AVTFSSAFYH YHLLKNLGVD
YTYIAYMMIV NNFVAMLVYR ILGKVSDRVG HKTIAEFGII LASFVSGMWF FMNTNTYRTL
MVADAFLSSI AWSAINLSLA ILPMEVAFES DPVFFGLNAS FASAGSLIGS FAGGITAKFL
SDIYVNLHGF EIFGLQLLFL MAGIFRFSAV FFLRKVKVKK HIPFKAFMLS TLSVTLRRPI
DRMLDVYLLL KRGNERVREL VGRSKRRESN TDEQGGKQG
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