Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0349 |
Symbol | |
ID | 5170733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 334177 |
End bp | 334833 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640562853 |
Product | hypothetical protein |
Protein accession | YP_001243954 |
Protein GI | 148269494 |
COG category | [S] Function unknown |
COG ID | [COG1655] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00317659 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGT TCTGGGAAAA AGAATTCACC TGCCCTTTCT GTGGAACGAA GTTCAAAAAG AAGATGGTCT TTTTCGACTC CATAAAGATC AAAGCCAGAG ATATCGACTT GAAACCTGTT TTTGAAGATG TGAACCCGAT GTTTTACGAA GTGGTGACCT GCCCGAACTG TTACTTTTCT GCGTTCGACA AAGATTTCGA GACCATCACC ATAAAAGGAG AAGAGACGGA AAGAAAGCTG AAAAAACTGC TCGAAGAAGC CAAGAAAAAG GTCGAATTGA AAAACGTGGA GAACCACGTG GAAGCGATCA AGCGCTACGC TTTGAGTGGA ATGGTGTACT CTGTTTTGAA CCAGAGAAAG AAAGTAGCGA TCTCTTATCT AAAGATCGCC TGGCTGTTCA GAGAGCTGGG AAAGTCAGAA GAAGAAAAGC GCTATCTCGA AAGAGCTTTG AAGGAATTCG AAAGCCACTA CAAGTACGAC TATTACCAAG AATCGGACGA ACCCATGATA CTCTTCTATC TGGGTGTTTT GAATCAAATC CTGGGCAACA GGAAAGAAGC CGCGAGGTGG TACGAACTCC TCCTGAGAAA GTACGACGGC AAATCCCTTT ACGCGAAGGT GGGGAGGGAA AGATGGCAGG AATTAAGAAG ATCTTAA
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Protein sequence | MSKFWEKEFT CPFCGTKFKK KMVFFDSIKI KARDIDLKPV FEDVNPMFYE VVTCPNCYFS AFDKDFETIT IKGEETERKL KKLLEEAKKK VELKNVENHV EAIKRYALSG MVYSVLNQRK KVAISYLKIA WLFRELGKSE EEKRYLERAL KEFESHYKYD YYQESDEPMI LFYLGVLNQI LGNRKEAARW YELLLRKYDG KSLYAKVGRE RWQELRRS
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