| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0285 |
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| Symbol | |
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| ID | 5171415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 267538 |
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| End bp | 269469 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562788 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001243890 |
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| Protein GI | 148269430 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGAAA GAGAACTAAC ACTCGGTGAC ATTCTTTTGA TGTTCAAAAG AAGATCAAAA
CTCTTCTGGC TCGTTCTTGT TCTGACCGTC CTTGCAACGG GGATTTATCT TCTCTTCGCC
ACACCAAAAT ACGAAGCCTC CGCGAAGGTG AAGGTCTCCA CACAGAAGGG TATGAGTCTT
GGACTCTCCA TTGAAGGGCT TCTCGGAGGC CTCTCCAGTC TTCTAGGAGG TGGAGGAGGA
AGCCTTGAAG ACGAAATACA GATCATGCTC TCTCGAAGAA ACATCGTGGC TGTGATAGAC
GAACTCGATC TCGTTCACAA ACTTCTCGAC GAGAAAGATA TAAAGAAAGC TATGGGAAAC
GGCCTCACAG AAGACGATTT AAAACTCTCT CTTTACAGTT ACATGGTAGA AAAGCTCATA
ACCGTAGAAC CTGTGAAAAA TTCGAACATA CTGGAAGTTA AATTCACCTG GCGGGATCCA
AAACTCGCTG CCGAGGTAGC GAACAAGATC GTAGAAAACT ACGTCAAGAT CAGTGAAAGC
ATCGCCAAAA CCCAGCTCGG GGCGAAAAAA GAATTTCTTG AAGAGCAAAT CCCCAAGGTA
GAGCAGGAAC TCAGAGAAGC AGAGAACAAA CTCAAGGTCT TCAAAGAACA GAACAAAATC
TACTCCGTTG AAGCACAGTA CCAAACGCTT ATAGAACGTT ACGCTTCTCT TCTTCAAAAG
ATGGAAGAAT CTCAGATCGC CATGGAAGCA GCACAGAAAC AGGCTGAATT CTTCTCAAAC
GAACTCAAAG ATCTCGATGT TGAGATAGAA CAGCTCAGAG ACAGTATCAC GTTCGATCCG
ATCATCTCCC AGCTCAAGAG CAGACTGATC AACATTCAAA TAGAACTCGC AGGGCTCATG
GAGCGCTACA CCGAATCGAA CCCTGCGGTA GTTCAAAAGA AAGCGGAATT CGAAGAAACT
CAGAAACAGC TCAAGGCGGA ACTCGAAAGA CTCCTCACAT CTCAGGTGAA AAAGACAGGC
TACACCATCT ACGGAGAAGC GCTCAGCAAT CTCATAAAGG CAGAGTCTGA AAGGATCCTC
TACCAGACAC AGTACGAAGC CTTCAAAAAG CTCTTTGAAA ACTTTGAAAA GGAACTCTCA
AAGCTTCCGG AACTCGAACA GAAACTCATC GAGCTCGAAA GAGACTACAA AGTGAAAGAA
ACGATCTACA CCACGCTTCT TCAGGCAAAA TACGAGTCGC TCATATCTGA AGCAGCGATC
ACGGCCAACG TCAACGTCAT AGACTGGGCT GTTCCGCCTC TCTCACCCTC GAAGCCGAAC
AAAAAACTCA CCCTCGCGGT CGGAGGAGTG CTCGGAATCT TCCTCGGAAT TCTCGCTGTC
TTCTTTGCAG AGTTCTCTGA CAGAAGGATC AAATCGGAAA GTGAAGCGGA GTACCTCCTC
GGTGTAGAAA AGATCGTGGC GAGAGTTCCT CTGACAAGCA AAAGTGAAGT GATAGAAAAA
GCCCTCGGAA TCCCCGCGGT GAAAGCTGGA AAGGTGGTGT TCATCACCGC CATCGAAGAC
GGAGCGGGTG TGAGCACCAT AGCAAAACAC ATGGCAAATC TTGTCTCAAA GAAAGAGAAA
GTGCTTCTTT TCACCGAAGA AAACGCGGAA GGCTCTTTCG ATAAAAGGGA CTTGTTCGAA
CTTCTGAAGG ATCCAGAGAT CTTAGAGAAT CTCAAACAGA GTTACGACAG AATCATCATC
GACGCACCCT CACTGAAGAG AACACCGGAG TTCCTCCCGG TATCGGAAAA AAGCGACACT
GTCTACATCG TGATCAGACT CGAACACACC TACTCAGAAG ACTTGAAAAT GCTCCACTCT
CTGAAGAAGA TAGACGGCTT CATCCTGAAC GGCCTGACAC GGAGAAACTC AGCGTACGTA
GAAGAAAAAT GA
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| Protein sequence | MEERELTLGD ILLMFKRRSK LFWLVLVLTV LATGIYLLFA TPKYEASAKV KVSTQKGMSL
GLSIEGLLGG LSSLLGGGGG SLEDEIQIML SRRNIVAVID ELDLVHKLLD EKDIKKAMGN
GLTEDDLKLS LYSYMVEKLI TVEPVKNSNI LEVKFTWRDP KLAAEVANKI VENYVKISES
IAKTQLGAKK EFLEEQIPKV EQELREAENK LKVFKEQNKI YSVEAQYQTL IERYASLLQK
MEESQIAMEA AQKQAEFFSN ELKDLDVEIE QLRDSITFDP IISQLKSRLI NIQIELAGLM
ERYTESNPAV VQKKAEFEET QKQLKAELER LLTSQVKKTG YTIYGEALSN LIKAESERIL
YQTQYEAFKK LFENFEKELS KLPELEQKLI ELERDYKVKE TIYTTLLQAK YESLISEAAI
TANVNVIDWA VPPLSPSKPN KKLTLAVGGV LGIFLGILAV FFAEFSDRRI KSESEAEYLL
GVEKIVARVP LTSKSEVIEK ALGIPAVKAG KVVFITAIED GAGVSTIAKH MANLVSKKEK
VLLFTEENAE GSFDKRDLFE LLKDPEILEN LKQSYDRIII DAPSLKRTPE FLPVSEKSDT
VYIVIRLEHT YSEDLKMLHS LKKIDGFILN GLTRRNSAYV EEK
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