Gene Tpet_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0248 
Symbol 
ID5171348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp237928 
End bp238545 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content48% 
IMG OID640562751 
Productpeptidase M50 
Protein accessionYP_001243853 
Protein GI148269393 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACA TGAGGATAAT CGTTCCCACA CTGAGCAACA TACTCACAGG GTTTCTCGCA 
GTGCTCATAG TCGCTACTCC CAGAGAGTAC ATCAAAGGCT TTGTAGCCTA CAAACTCGGT 
GATACCACAC CGAAACAGGC CGGAAGGCTT TCTCTGAACC CCTTTGTTCA TCTCGATCCA 
CTGGGAACGA TCTCTTTCAT CCTCTTCGAG TTCGGGTGGA CGAGATCCGT GCCCATTCGC 
TATTGGAAGC TCAAAAACAA AAAGAAGGAT CTTTTGAAAA TCTCGCTGCT CGGTCCTGCC 
GTTAGCTTCA TCCTTTTCTT TCTTTGTGGA TTGATCGCCT CGCATCTTCC CGAGGAGGAT 
TTCTGGTGGT TTCTCATGGT GAAGGCCGCA AAGTACAACC TCACGTACGC GCTCTTTTCT 
CTTTTTCCCA TACCCCCTCT CGATGGAAGC AAGATTCTCG CTTCTCTTCT TCCCGACAAG 
TATATGGAGT GGCTGGTAAA ATACGAGGTG TACGGGGTTC TCTTCATGAT CGCTCTGCTC 
GTGCTCTGGA TAATACCACT CGTTATGAAT CCCTTTGTGA GGTTCATCGA TGGTTTTGTC 
TGGATGATCG TGAGGTGA
 
Protein sequence
MVNMRIIVPT LSNILTGFLA VLIVATPREY IKGFVAYKLG DTTPKQAGRL SLNPFVHLDP 
LGTISFILFE FGWTRSVPIR YWKLKNKKKD LLKISLLGPA VSFILFFLCG LIASHLPEED 
FWWFLMVKAA KYNLTYALFS LFPIPPLDGS KILASLLPDK YMEWLVKYEV YGVLFMIALL 
VLWIIPLVMN PFVRFIDGFV WMIVR