| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0246 |
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| Symbol | |
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| ID | 5170361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 236868 |
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| End bp | 237461 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640562749 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001243851 |
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| Protein GI | 148269391 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC AGAGGAGGAA AATCGTGAAA AAAATAACTA TCTTGATCTT GGTGCTCGTG
GTGGTCCCTG TTTTTCTGAG CACCGTTCCT CCGGAAGATA ATATTTCCTT TCGCGAGATC
AACTCCATCG CGGTGAAGGA ATGGTTCAAA GAACTGGTCA GATCAAGAAG AGCCTCCTAC
AAACTGAAAA GCGATGAAGA ATTCCTCGAA GATCTGTGGA AAACGATAAA CAACGTGGCA
AAAGAAACGA ATTTCGATCC TATTCTCATA ATATCCGTCA TAGATGTGGA AAGTGACTTC
AGAAATGTTG TGGGGTTGTA CGGAGAACTC GGTATGATGC AGATAAAGAA AGAGACGGCG
GAGATGGTGG CGAACCTGTA CGGTCTGGAA ATCCCAGAGT CAGGCTGGAC AGAACTCGTG
TGGAACTACC GGTTGAACAT AAAGTACGGA GCCCACTATT TGAAGTACCT CTTCGACAAG
TTCAACAGTT TGAGATTGGC ACTCGAGTAC TACAACGGTG GAAACAGCAG AAAGTCCTAC
GCACGAAAGA TACTGGAAAC GTACGAAGAG TTCAAGAAAG AACTGGGGAT CTAA
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| Protein sequence | MIEQRRKIVK KITILILVLV VVPVFLSTVP PEDNISFREI NSIAVKEWFK ELVRSRRASY
KLKSDEEFLE DLWKTINNVA KETNFDPILI ISVIDVESDF RNVVGLYGEL GMMQIKKETA
EMVANLYGLE IPESGWTELV WNYRLNIKYG AHYLKYLFDK FNSLRLALEY YNGGNSRKSY
ARKILETYEE FKKELGI
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