Gene Tpet_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0239 
Symbol 
ID5170298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp230833 
End bp231483 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content47% 
IMG OID640562742 
Productmethyltransferase type 11 
Protein accessionYP_001243844 
Protein GI148269384 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTCG ACCCCGATAT CATCAGATGT GTCGAGATAG TGGACGCGGG TCCTCAGCAA 
AGACCAACCC ACGCCTCATC GCTTCTCGTA TGGTATGCGA AACCATCCAA GGACGTCAGA 
AACGTTCTGG AACTTGGTAG CGGTGTGGGA ACGGTGAGTT TTGCCCTTGC AAAGCTCTAC 
AACGTGCAAG TGGTTGGAGT GGAAAAAGAA AAGGAATTGT ACGAGAAGGC TCTCGAAGGT 
ATCTCGTTGA ACAAACTTGA GGGAAAGGTC TCTTTTGTGA ATTCCTCGGT GGAAGAACTT 
CCCTTTCCAT GGGAATCTTT CGATATGGTC GTTTCGAATC CCCCTCATCA CACAAAAGTT 
AAAAGCCCCA ACCACTTGAG AGCCTCCACC CGGAGCATTG AAAAGAGAGA CATAGAAAAG 
TTTGTACAGG CAACGTTTCG TTTTTTGAAG AACGGGGGAA CAGCCGTTTA CGTTCTTTCG 
CCGGAGAACC TTGTGGAGTG GCTGGAAATG TTTTTGTCTT TCAGATTGGA GCCCAAGAGA 
ATGTGTTTTG TCCATGGTAA AATTGAGAAG GCTGCAACCC TCGTTCTTTT AAGATTGAGG 
AAAAACGGAA AAAGGGGATT GATTGTAGAT CCTCCGGTGG TCCTTTCATG A
 
Protein sequence
MKFDPDIIRC VEIVDAGPQQ RPTHASSLLV WYAKPSKDVR NVLELGSGVG TVSFALAKLY 
NVQVVGVEKE KELYEKALEG ISLNKLEGKV SFVNSSVEEL PFPWESFDMV VSNPPHHTKV 
KSPNHLRAST RSIEKRDIEK FVQATFRFLK NGGTAVYVLS PENLVEWLEM FLSFRLEPKR 
MCFVHGKIEK AATLVLLRLR KNGKRGLIVD PPVVLS