Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0235 |
Symbol | clpP |
ID | 5171792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 228162 |
End bp | 228773 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640562738 |
Product | ATP-dependent Clp protease proteolytic subunit |
Protein accession | YP_001243840 |
Protein GI | 148269380 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTGA AGGAAAAGAA GATAATTGAT CAATACGTTC CCATAGTCGT TGAGTCTACG GGAAGGTACG AGAGAGCCTA CGACATCTTC TCGAGGCTCC TAAAGGACAG AATAGTTTTC CTCGGATCCC CCATAGACGA CTATGTTGCA AACCTGGTCA TAGCTCAACT TCTGTTTCTT GAGGCGGAGG ATCCGGATAA AGACGTCTAC CTCTACATAA ACTCCCCCGG AGGTTCTGTG ACGGCGGGAC TCGCTATCTA CGATACGATG CAGTACATAA AGTGTGATGT CTCAACCATA TGTGTAGGAC AGGCGGCTTC CATGGCGGCT GTGCTCCTCG CAGCCGGTGC AAAGGGAAAA AGGTACGCGC TTCCGAACGC TCGAATAATG ATACACCAGC CGCTCGGTGG TGCTGAGGGA CCTGCCAAGG ATGTGGAGAT CATCACGAGA GAGCTTCTGA GAATAAAAGA TCTTCTCAAC AGAATTCTGA GTAAACACAC GGGACAGCCG ATTGAAAAGA TAGAAAAAGA CACAGACAGA GATTTCTTCA TGAGTGCAGA AGAAGCGAAA GAGTACGGGA TAGTCGATAA AGTCGTCAGC ACAAGAGAGT AA
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Protein sequence | MTVKEKKIID QYVPIVVEST GRYERAYDIF SRLLKDRIVF LGSPIDDYVA NLVIAQLLFL EAEDPDKDVY LYINSPGGSV TAGLAIYDTM QYIKCDVSTI CVGQAASMAA VLLAAGAKGK RYALPNARIM IHQPLGGAEG PAKDVEIITR ELLRIKDLLN RILSKHTGQP IEKIEKDTDR DFFMSAEEAK EYGIVDKVVS TRE
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