| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0215 |
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| Symbol | |
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| ID | 5171201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 209364 |
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| End bp | 211955 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562718 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001243820 |
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| Protein GI | 148269360 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG3448] CBS-domain-containing membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGTCA TCACCACACA CAGGTCACCC GATTTCGATG CCTTCGCTTC CTGTGTCGCG
GCGAAGAAGC TGTTTGATGA CCACATCATA GTTCTGCCTT CCAATCCGGC GAGGAATCTC
TCCGATTTCC TCAAAGTCTA TTTGGATCGG TTTGAATTCA TCTGGGATCA CGAGTTTGAA
GGCGAGGTCA CAGAACTCGT GATCGTCGAC ACACCTTCTC CGGATCGGAT TCCAGAGAAT
ATCAGAGAAA AAAGTCAAGG AGCGAAGATA ACAGTTTACG ATCACCATGT GGATGAAAGT
CCATACGATG GAATAGTATC GAAGGTGGGA GCCACGATAA CGATACTCGT TGAGCTCATT
CGAGATAAAA ATATACCACT GGATCCCACC GAAACCACTC TCTTCATGAT CGCTCTCTAC
GACGACACGG GAAATCTACT CTTTTCTTCA ACCACACCGC GGGATCTGGA GATAGCGAAG
TTTCTTCTGG AAAACGGTGC AAATCTCGAT GAAGTGGCAC TTTACACAAG AGAAGAGCTC
ACTCCTAAGC AGATGGAACT GCTGGACGAA CTGATAGAGA ACGCTCGTGA TTATGAAGTG
AACGGTGTTC CGATAACCAT TTCAGTGATG GAGTGCGAGG ACTTTGTGGG AGGATTGGGG
CTGATTGTGA GTAAGGTCTG GGAGATGCTG GGAAAGGAAA CCTTCATAGC GATTGTGAAG
ATGGGAAAGA AGATCTACGT TATTGGAAGA ACCGGTTCAC CCGACGTGGA TCTCGGCTCT
TTCATGAAAG ACCTCGGAGG AGGCGGGCAC ATGAGGGCAG CCTCCGCAAC TATCACCGGA
AAAGAGATCG ACGAGGTTCT GAAAGAGGTT TTGAATAAAC TCCACGATCA TGTGGTTCCT
CTCCTTCGCG CAAGAGATAT CATGTCCTCT CCCGTGAAGG TGGTCCTCTC TGACATGACG
ATAGGAGAAG TGGATAGATT GATGAAGCAA ACCGGACACA GTGGATTTCC AGTTGTTGAG
GGGAACAGGC TGGTAGGTAT TGTTACGAAG AAAGCAGTTG AGAAGGCGAT GAACCATGGT
CTGGGTGACA GGCCTGTGAA GTCCATCATG TCGACGAACC TGGTGGTGGC GACTCCTGAT
ACTCCTGTGA CCAGGTTGAG AGAACTCATG GTGGAACACG CCATCGGACG AATTCCTATA
CTGGAGAACG GCATTCTCGT GGGCATCGTA ACAAGAAGTG ACGTTCTGAG GGCGATATTC
GGGAAACCCT TCAAAAAATA CGTGATGCCG GTGTTTCAGG CGAACGGACA GATATTCAGA
GATGTTTCAA AGCTCCTCGT AGAACGGGTA GATCCGAAGA TCTTGAATCT TTTCAGACTT
CTCGGGAAAT TCGGCGACGA GGTGAACATG CCCGTTTATG TCGTGGGGGG CTTCGTTCGT
GATCTTCTCC TCGGCATAGA GAATCTCGAT ATAGACATCG TTGTTGAAGG CAACGCGCTG
GAATTCGCCG AGTACGCCAA ACGTTTTCTG CCGGGAAAAC TAGTGAAACA CGATAAATTC
ATGACCGCTT CTCTTTTTTT GAAGGGAGGT CTCAGAATAG ACATCGCAAC GGCGAGGTTG
GAGTACTACG AATCACCCGC CAAGCTCCCC GATGTGGAGA TGAGTACGAT AAAGAAGGAT
CTCTACAGGA GAGATTTCAC GATAAACGCG ATGGCTATAA AGCTTAACTC GAAAGATTTC
GGACTGCTGA TCGATTTCTT TGGGGGATAC AGGGATCTGA AAGAAGGAGT AATACGGGTC
CTTCACACCC TGAGTTTTGT AGACGATCCC ACAAGGATTC TGCGTGCCGT TCGTTTTGAA
CAACGTTTTG ACTTCAGAAT CGAAGAGACA ACAGAGAGGC TCCTGAAACA GGCTGTTGAA
GAAGGATACC TTGAGCGAAC AACTGGTCCA CGCCTCAGAC AGGAATTGGA GAAAATACTC
GAAGAGAAAA ACCCTCTGAA GTCAATCAGG AGGATGGCGC AATTCGATGT GATAAAACAT
CTGTTCCCAA AAACCTATTA CACCCCTTCC ATGGACGGAA AGATGGAAAA TCTCTTCAGA
AACATTCCGT GGGTGGAGGA GAACTTCGGA GAAGTTGACA AATTCTACGC AGCGCTCCAC
GTGTTTCTCG AGTTCTACGA CGATGAGAGC TGGAAAGAAG TGAGAGATAG ATATTCTCTT
CGCCGAAACC TGATAAACGA AATCAGACAC GTGGAAAAGA GTGCACCCGC TCTTCTGGAG
ATGCTTTCGG AAAGGGTTCC TGTTTCTTTT GTTTATCCTC TTGTGAAGGG AGTCTCGAGC
GAGACGATCT GTCACTTCCT GGCGTATCTC AGCGGTGAGA AAGAAGAGTT GTTCAAATCC
TATCTTCTGA AGATAAAGAA CACGAAGCTC GAAAAGATAA ACGGGGAGTA TCTCATCAGA
AAAGGGATAA CATCCGGTAA AATAATTGGA GAGGTTCTCG AGAAGATTCT CATGAGAAAA
CTCGATGGAG ATACAAGAGA TGAAGAGGAG ATACTGAAGG AAGTCCTGGC ATCATTAGAA
ACGGAGGGAT AA
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| Protein sequence | MRVITTHRSP DFDAFASCVA AKKLFDDHII VLPSNPARNL SDFLKVYLDR FEFIWDHEFE
GEVTELVIVD TPSPDRIPEN IREKSQGAKI TVYDHHVDES PYDGIVSKVG ATITILVELI
RDKNIPLDPT ETTLFMIALY DDTGNLLFSS TTPRDLEIAK FLLENGANLD EVALYTREEL
TPKQMELLDE LIENARDYEV NGVPITISVM ECEDFVGGLG LIVSKVWEML GKETFIAIVK
MGKKIYVIGR TGSPDVDLGS FMKDLGGGGH MRAASATITG KEIDEVLKEV LNKLHDHVVP
LLRARDIMSS PVKVVLSDMT IGEVDRLMKQ TGHSGFPVVE GNRLVGIVTK KAVEKAMNHG
LGDRPVKSIM STNLVVATPD TPVTRLRELM VEHAIGRIPI LENGILVGIV TRSDVLRAIF
GKPFKKYVMP VFQANGQIFR DVSKLLVERV DPKILNLFRL LGKFGDEVNM PVYVVGGFVR
DLLLGIENLD IDIVVEGNAL EFAEYAKRFL PGKLVKHDKF MTASLFLKGG LRIDIATARL
EYYESPAKLP DVEMSTIKKD LYRRDFTINA MAIKLNSKDF GLLIDFFGGY RDLKEGVIRV
LHTLSFVDDP TRILRAVRFE QRFDFRIEET TERLLKQAVE EGYLERTTGP RLRQELEKIL
EEKNPLKSIR RMAQFDVIKH LFPKTYYTPS MDGKMENLFR NIPWVEENFG EVDKFYAALH
VFLEFYDDES WKEVRDRYSL RRNLINEIRH VEKSAPALLE MLSERVPVSF VYPLVKGVSS
ETICHFLAYL SGEKEELFKS YLLKIKNTKL EKINGEYLIR KGITSGKIIG EVLEKILMRK
LDGDTRDEEE ILKEVLASLE TEG
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