| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0182 |
|---|
| Symbol | |
|---|
| ID | 5170859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 177717 |
|---|
| End bp | 178925 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640562684 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_001243787 |
|---|
| Protein GI | 148269327 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0641627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGA ACCAGATTTC AAAGTTTGCT ATCGTCAGTG TAGTAGTACT CGTTCTTGCG
CTTCTTCTCG GGGGTTCTGC TAAAACGAAT CTCACCGTAG AAGAAGTGAA CAAGGCATTG
GAGCCGTTCT TTGATTCGCT TTCTTACATC CTGAACTATT ACTACGAAGC GGACAAGCTT
GACATCAACA AGCTCATAGA CCACGCGATA GACGGCCTTG TGAAGGGAAC GGGAGACGAT
TTTTCCTATT ATCAGGACCC AGAAACCTAC CGTGAAAACC AGATAGAAAT GAAGGGAGAG
TACGGTGGGC TTGGAATAGA AGTGACCTAC GATGCGGAAC ATGGCGCTAT AAAGGTAGTG
GCTCCTATGT ATGGCACTCC CGCCTGGAGG GCTGGACTCA AAGCGGGTGA TCTCATCATA
ACCATAGACG GCACACCCGT GTCCAAGATG ACCTACATGG AAGCCGTGAA CAACCTGAGA
GGAGAACCCG GAACCTCTGT CACGATCGAG GTTCTCAGAG ACGGTGAAAA ACTCACCTTC
ACCATCGTGA GGGAGAAGAT CGAGATAAAG ATGGTGCTTT ACTCCTTCAT AGAAACGGAA
AAAGGAAGTA TCGGGTACGT CAGGATCACA CGCTTCGGAG AAAAAGCAGA TTCCGACATG
AAAAACGCTC TGGACAAGAT CTTCGAAAAG GGTGTGAAGG GATTGATAAT CGATGTGAGG
GACAACCCCG GTGGATACCT CGATGTCGCT CTCAAGATCG TCAGCATGTT CGTCGACAAA
GGTGTGATTC TGAAGGTCAG AAACGGATTC GGAGAAGAAG ACGTCTACGA ATCCTATGGA
AACAGCTATC CGAACGTACC GATAGTACTT CTGGTGAACG AAGGATCGGC CTCGGCATCC
GAGATACTGA CGGGAGCGCT CAAAGACCTC GGCATTGCAA CCGTTGTTGG GAGAAAAACC
TTCGGTAAAG GTTCAGTCCA GACAGGTTTC CCACTGAGCA ACGGTGGTGT TCTCTTTCTC
ACAACGGCTC ACTACCTGAC ACCATCTGGA AAGGACATTC ACAAGATCGG AATAGAGCCC
GATGTCCTGG TAGAAGAAAG CGTTGAGGAG GAACTCCATG CAGAAACCAG AGAACAGATA
GAAGTAGATC CAGAAAAGGA TCCATTCGTG AAAAAGGGCC TCGAGGTGTT ACTCGAGAAA
ATAAAATGA
|
|---|
| Protein sequence | MRLNQISKFA IVSVVVLVLA LLLGGSAKTN LTVEEVNKAL EPFFDSLSYI LNYYYEADKL
DINKLIDHAI DGLVKGTGDD FSYYQDPETY RENQIEMKGE YGGLGIEVTY DAEHGAIKVV
APMYGTPAWR AGLKAGDLII TIDGTPVSKM TYMEAVNNLR GEPGTSVTIE VLRDGEKLTF
TIVREKIEIK MVLYSFIETE KGSIGYVRIT RFGEKADSDM KNALDKIFEK GVKGLIIDVR
DNPGGYLDVA LKIVSMFVDK GVILKVRNGF GEEDVYESYG NSYPNVPIVL LVNEGSASAS
EILTGALKDL GIATVVGRKT FGKGSVQTGF PLSNGGVLFL TTAHYLTPSG KDIHKIGIEP
DVLVEESVEE ELHAETREQI EVDPEKDPFV KKGLEVLLEK IK
|
|---|
| |