Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0135 |
Symbol | |
ID | 5171528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 131121 |
End bp | 132350 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640562636 |
Product | transposase, putative |
Protein accession | YP_001243740 |
Protein GI | 148269280 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTAA CTCTGACCTG TAGATTCAAA CTTGAACTTA GCAAAGACCA AAAACAGCAG TTCCTGGATA TTGCGACGGC TTACACAAAC GCCGTCAACT ATGTGCTCGA ACAAAACTTC AAGGATAAAT CGACGAACGT TAAAAAGCTC CATAGACTTT ACTACAGCAC AATTCGTGAA AAGTTCAGCC TTCCAGCTCA AATAGCCATC AATGTGAACA GAGACGTTTC TGCAATGTAC AAAACTCTCT GGGCTCAGTT CAAAGAACTC AAGCGTCGAA AACCCGATTC GAAAGCAGTC AAGAAATTCT GGGATAAACC ACCGAAGCGA AAGAGCCTGA TCGTCAAATA CACATACAAC CGAACTGCAA GCTTCAAAAA AGTCAACGGA GAGTGGCATG CTTCTTTGTC CACGCTTCAA GGACGAATCA AATGGATCCC GATGAAAGGC TGGTCCAAAC ACTTTGAGTA CCTCGAGTCT GGCAAGATCG GCGATCCGAT ACTGACTTAC GACAAATCAT CCAAAACCTT TTTCTTGCTT GTTCCCGTAA CACTTGAAGT TCAGGAGCAG CCACCGAAAG AAATCGTCGG TGTTGACGTT GGAGAAAGAC ACATTGTTGC TGTTGCTTCT ACCAGAGGCA CCAGGTATTT GATAGACCTT CCTGAAGAGT TCAAACAAAG AAAACAACAC TATCAGCGTC TGCGCTCTGA GCTCATGTCA AAAGGCACTC GCTCTGCTAA GAGAAAACTT GCCAGGATCA GCAGGCGAGA GAAACGGTTC ACTGAGAACG TACTGCACAT CATTGCAAAA AAGCTCATCA CAAACCATCC TGGTGCCAAG TTCGTTCTCG AAGACCTTAC TTACATCAAA GCCAACAGAA TCACCTACCG TGGTAAAGAC AAGGAAGCAA GAAGACAGTC AGAGCAATGG CCATTTGCAA GTCTTCAGCA GAAGATAGAG TACAAATCAA AGCTCTACTA TGGAGTTCAG TCCGAGAAGG TCGATCCAGC ATATACATCT CAGACATGTC CTGTGTGTGG TCACGTCTCT AAAGAAAACA GACCAGACCA TGGAGAGCGT TTTATATGTC AAAACTGCGG CTACGAAGAA CACGCAGACA TAGTTGGTGC AATCAACATA GCTCTAAAAG TTCTTGCCAA AGACCAGCAG GTCAATCTTG AAAATCTCTT AAGGGCCGAT GTCAGCCGGC CTAATGCTCC CTCCTCGTGA
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Protein sequence | MTVTLTCRFK LELSKDQKQQ FLDIATAYTN AVNYVLEQNF KDKSTNVKKL HRLYYSTIRE KFSLPAQIAI NVNRDVSAMY KTLWAQFKEL KRRKPDSKAV KKFWDKPPKR KSLIVKYTYN RTASFKKVNG EWHASLSTLQ GRIKWIPMKG WSKHFEYLES GKIGDPILTY DKSSKTFFLL VPVTLEVQEQ PPKEIVGVDV GERHIVAVAS TRGTRYLIDL PEEFKQRKQH YQRLRSELMS KGTRSAKRKL ARISRREKRF TENVLHIIAK KLITNHPGAK FVLEDLTYIK ANRITYRGKD KEARRQSEQW PFASLQQKIE YKSKLYYGVQ SEKVDPAYTS QTCPVCGHVS KENRPDHGER FICQNCGYEE HADIVGAINI ALKVLAKDQQ VNLENLLRAD VSRPNAPSS
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