Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0117 |
Symbol | |
ID | 5171218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 110957 |
End bp | 111859 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640562618 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001243722 |
Protein GI | 148269262 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGGAA GGTACTACAA GAGTCTGAGA AAAAAACAGC TTCTTCTTGC ATTCTTCTTC ATAACGATCC CAACTCTCCT CATGGTGCTT TTCATATATT ATCCTCTCGT GTTCGGTATC AAAATATCCT TTTACCAGTA CGACATAGTG GGAGAATCTC TTTATATTGG ACTGAAAAAC TACGTCGATC TGCTTCGCGA TCCTTTATTC TGGAACGCCT TCAAAAACAG TCTTTTGTAC CTGCTTGTTG TACCTCCGCT CCAGCTCATT TCTATACTGC TTGCGGTCCT GCTCGACAGG GCCATAAGGG GTAGGAATCT TTTCAGAACT CTCATCTTTC TTCCAGTGGT TACTCCCATC ACCATCGCTG CGATCACATG GCAGTGGATG TACAGAGAAA AAGGATTCAT CAACTTTCTT CTCCAATCAC TTCATATTAT AGACGAGCCG ATTGCTTTCC TCTCGGATCC CAAGATAGCT CTCTTCGCTA TCATGTTTGT CACCATGTGG AAGGGCTTCG GTTACTACAT GGTCATATAT CTGGCGGGGC TCCAGAGCAT CCCCAGGGAA TTGATAGAAG CTGCCAGGGT TGACGGTGCG AAACCTTCTC AAGTCTTTTT CAAGGTGACG ATTCCCCTTC TGAAACCGTA CATCTTGTTT TGCTCAACCA TGTCGTCCAT AGCGGCTTTG AACGTCTTCG GAGAGATTTA CGCTATGACA AAGGGTGGAC CGGTTCACGC AACGGAAACA ATGGGAATTT TCATATACAA TCGAGCTTTT GAATATCTCC AGTTCGGGTA CTCGAACGCT GCCGCTGTTC TGTTCAGCTT CGTTGTGATT GCATTTTCGC TTTTGAACTT CTATCTGTTC AGGGAAGGAG GTTTGAAGAG CTATTATGCC TAA
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Protein sequence | MPGRYYKSLR KKQLLLAFFF ITIPTLLMVL FIYYPLVFGI KISFYQYDIV GESLYIGLKN YVDLLRDPLF WNAFKNSLLY LLVVPPLQLI SILLAVLLDR AIRGRNLFRT LIFLPVVTPI TIAAITWQWM YREKGFINFL LQSLHIIDEP IAFLSDPKIA LFAIMFVTMW KGFGYYMVIY LAGLQSIPRE LIEAARVDGA KPSQVFFKVT IPLLKPYILF CSTMSSIAAL NVFGEIYAMT KGGPVHATET MGIFIYNRAF EYLQFGYSNA AAVLFSFVVI AFSLLNFYLF REGGLKSYYA
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