Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0116 |
Symbol | |
ID | 5171216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 110149 |
End bp | 110964 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640562617 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001243721 |
Protein GI | 148269261 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAGA TCAGAAAGAT CTTGACTTAT GTGGTCCTTG TTCTTTTTTC GATTCTTTCA GTGTGGCCGT TTTACTGGAT TGCAAAGACC TCTTTCGAGG CAGGGGGCAA CGTGTACAAG TATCCACCGA GTCTCATTCC GTACCCGGCA ACCTTTTCAA ACTACGTTGG GGCATGGAAA ACGGTGAAGC TTGGAAATTA CTATCTGAAC ACGATTATAA TAGCGGGTTT TGGCACACTT TTGAACGTGC TTTTCTCGCT GATGGTGGCC TATCCTCTCG CCAGAATAGA CTTCAAAGGG AAACAGCTGG TGCTCTTTCT GATTCTTCTT CCAATGATGA TTCCAGTTCA GAACACCCTG ATAGTCAACT ACCTCACCCT CAGAAAGCTC AGTCTTCTGA ACACCTACAC CGGGGTGATT CTCCCCCAGG CTGTTACGAT CTTCGGTATA TTCATGATGA GACAGGCTTA TTTGAGTGTT CCGAAGAGCT TCGAAGACGC TGCAAGGATA GATGGTGCCG GAGAACTCTA CATATGGTGG AGGATAATCA CACCTCTGAT AAAACCAGAT ATTGCCACTC TCGTTGTGTT CCAGGTGATC ACCTGGTGGG ACAATTTCCT GTGGCCTCTC ATAGTTCTGT CCGATTCCAA CAAGTATCCT CTCTCTGTGG CACTCGTTTA TCTGAACAGC ACTTTTCAGG TGAATTTCAG ATACACCGCA GCCGGAATCG TTCTGGCAAT ACTTCCTGTT GTGGTACTGT TCATCTTCGC TCAGAGGTAC ATAATAAACG CTATTGCCGG TGGCGTGAAA TACTGA
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Protein sequence | MPKIRKILTY VVLVLFSILS VWPFYWIAKT SFEAGGNVYK YPPSLIPYPA TFSNYVGAWK TVKLGNYYLN TIIIAGFGTL LNVLFSLMVA YPLARIDFKG KQLVLFLILL PMMIPVQNTL IVNYLTLRKL SLLNTYTGVI LPQAVTIFGI FMMRQAYLSV PKSFEDAARI DGAGELYIWW RIITPLIKPD IATLVVFQVI TWWDNFLWPL IVLSDSNKYP LSVALVYLNS TFQVNFRYTA AGIVLAILPV VVLFIFAQRY IINAIAGGVK Y
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