Gene Tpet_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0111 
Symbol 
ID5171162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp105075 
End bp105503 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content46% 
IMG OID640562612 
ProductMarR family transcriptional regulator 
Protein accessionYP_001243716 
Protein GI148269256 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.238503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCTC TGGAGATATT CAAAACACTC TTTTCGCTGG TGATGAGGTT TTCCAGTTAT 
CTTCCATCGA ACGAAGAGAT CTCTGACATG AAAACAACGG AGCTCTACGC GTTCCTCTAC
GTGGCTCTCT TCGGTCCAAA AAAGATGAAG GAGATAGCGG AGTTTCTTTC CACAACGAAG
AGCAACGTAA CGAACGTGGT GGATTCTCTG GAGAAAAGAG GCCTGGTCGT CAGAGAGATG
GACCCTGTTG ATAGAAGAAC GTACCGGGTG GTCTTGACCG AAAAGGGAAA GAAAATCTTC
GAAGAGATTC TTTCGAACTT CGAAAGTCTT TTGAAAAGTG TTCTTGAGAA ATTTTCCGAG
GAAGATCTCA AAGTGGTGAG CGAAGGATTC AATCGAATGG TGGAAGCCTT GTCGAGGGAG
GGAAGGTAG
 
Protein sequence
MDALEIFKTL FSLVMRFSSY LPSNEEISDM KTTELYAFLY VALFGPKKMK EIAEFLSTTK 
SNVTNVVDSL EKRGLVVREM DPVDRRTYRV VLTEKGKKIF EEILSNFESL LKSVLEKFSE
EDLKVVSEGF NRMVEALSRE GR