| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0107 |
|---|
| Symbol | |
|---|
| ID | 5171434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 99663 |
|---|
| End bp | 100850 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640562607 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_001243712 |
|---|
| Protein GI | 148269252 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000469096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACT TCGTCTTCCA CAATCCCACG AAGATCGTCT TTGGAAGAGG AACGATTCCA
AAAATAGGAG AAGAGATAAA GAACGCGGGA ATCAGAAAGA TGCTGTTCCT ATACGGTGGT
GGATCGATAA AGAAAAATGG CGTTTATGAT CAGGTTGTCG ATTCACTGAA AAAGCACGGA
ATAGAGTGGG TAGAAGTATC TGGTGTCAAG CCGAATCCAG TCCTTTCCAA GGTCCACGAA
GCCGTCGAGG TGGCGAAAAA AGAAAAGGTG GAGGCTGTTC TTGGTGTTGG TGGAGGAAGC
GTTGTGGATT CTGCAAAAGC AGTAGCGGCT GGTGCCCTAT ACGAGGGCGA CATATGGGAT
GCTTTTATCG GTAAATACCA GATCGAGAAA GCCCTTCCTA TTTTCGATGT GCTAACAATT
TCGGCTACGG GAACGGAGAT GAACGGTAAT GCTGTGATAA CGAACGAGAA AACGAAGGAA
AAATATGGAG TGAGTTCGAA GGCTCTCTAT CCAAAAGTAT CCATAATCGA TCCTTCTGTT
CAATTCACTC TTCCAAAAGA ACAAACAGTT TATGGAGCGG TGGATGCGAT CTCACACATC
CTCGAGTACT ATTTCGATGG GAGCAGTCCT GAGATCTCCA ACGAAATAGC GGAAGGTACT
ATCAGAACGA TCATGAAAAT GACAGAAAGA TTGATAGAAA AACCGGATGA CTACGAAGCA
AGGGCAAATC TCGCGTGGTC TGCAACGATC GCTCTCAATG GAACGATGGC AGTCGGAAGA
AGGGGCGGAG AGTGGGCTTG TCACAGGATC GAGCACTCCC TCAGCGCTCT TTACGATATT
GCACACGGAG CGGGTCTCGC CATTGTGTTT CCGGCGTGGA TGAAGTATGT GTACAGAAAG
AATCCTGCGC AGTTCGAAAG GTTTGCGAAA AAAATCTTCG GATTTGAGGG TGAGGGAGAG
GAACTGATTC TGAAAGGGAT AGAAGCTTTC AAAAACTGGC TGAAGAAGGT AGGAGCTCCT
GTGTCCCTCA AAGATGCGGG AATCCCAGAA GAAGACATAG ACAAGATCGT GGACAACGTC
ATGCTTCTTG TGGAAAAGAA TCTGAAACCT AAAGGAGCGA GTTTGGGAAG AATAATGGTG
CTCGAAAGAG AAGACGTTCG TGAAATATTG AAATTAGCGG CGAAATGA
|
|---|
| Protein sequence | MKNFVFHNPT KIVFGRGTIP KIGEEIKNAG IRKMLFLYGG GSIKKNGVYD QVVDSLKKHG
IEWVEVSGVK PNPVLSKVHE AVEVAKKEKV EAVLGVGGGS VVDSAKAVAA GALYEGDIWD
AFIGKYQIEK ALPIFDVLTI SATGTEMNGN AVITNEKTKE KYGVSSKALY PKVSIIDPSV
QFTLPKEQTV YGAVDAISHI LEYYFDGSSP EISNEIAEGT IRTIMKMTER LIEKPDDYEA
RANLAWSATI ALNGTMAVGR RGGEWACHRI EHSLSALYDI AHGAGLAIVF PAWMKYVYRK
NPAQFERFAK KIFGFEGEGE ELILKGIEAF KNWLKKVGAP VSLKDAGIPE EDIDKIVDNV
MLLVEKNLKP KGASLGRIMV LEREDVREIL KLAAK
|
|---|
| |