Gene Tpet_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0104 
Symbol 
ID5170171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp95564 
End bp96136 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content42% 
IMG OID640562603 
ProductTetR family transcriptional regulator 
Protein accessionYP_001243709 
Protein GI148269249 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCTTCG AAACAAGAAA AAAAATCCTC GAAGCGGCAA GGAAAGCATT CTCAAAATAC 
GGTTACGATG GAGTCAGCAT GGAAGAAATC GCACGTGAAG CTGGTGTGAA AAAGGCTCTC 
ATCTACTACT ATTTTCCAAG CAAGGACAAA CTTTTCGAAG AGATCTGGAG AGAAGCACTC 
GAGGAACTGG AGAGTCATCT TTTTTCCGTC ACTGAAGAGA CGAACTCCTA CTTTGCGAAA 
ATAAAAAAGT TTCTGAAGTC CTACGTCGAC TTTGTTCTGA ATAAGACCAT TTTGAACGAA 
ATCATCGAAA AAGAAAAATC GACCGTCAGA TTCGAAAGAG AAAAGTGGTC GAAACTCAGA 
GAGCGTTATG AGAACTTCAT AAAGCGAGTC GAAGAACTAA TAGAAGAAGG GAAGAAGCAA 
AACTACGTTT ACAAAGATCT CGATTCCCGA GCTGCCGCGG AGCTGATAGT CAACTCGTTC 
GGAGACGTTC CAAAGGATAA GAGACTGCTT CAGAACATCC AGGAAATGAT ACTCAGAGGA 
TTGCTCAATG TGAAAACAGA AGAGGGGCGT TAG
 
Protein sequence
MSFETRKKIL EAARKAFSKY GYDGVSMEEI AREAGVKKAL IYYYFPSKDK LFEEIWREAL 
EELESHLFSV TEETNSYFAK IKKFLKSYVD FVLNKTILNE IIEKEKSTVR FEREKWSKLR 
ERYENFIKRV EELIEEGKKQ NYVYKDLDSR AAAELIVNSF GDVPKDKRLL QNIQEMILRG 
LLNVKTEEGR