Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0089 |
Symbol | |
ID | 5170099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 80572 |
End bp | 81777 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640562588 |
Product | S-layer-like domain-containing protein |
Protein accession | YP_001243694 |
Protein GI | 148269234 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1361] S-layer domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000364346 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTATT TTTCTAAGAG CCCTGAAGAG TGGCAAAAAA GAGACGAAGA AAGAGAAAGA GAGTTCAGAA ACAGAAAAGA CAGAATTCGC CGCAGGGCGA ATTTTATTCT TGTTGTGAAT CTTGTGATAG TAGTTTTCCT GGTGTTTTTC ACGAAAGCGT TTTTTTCCAA CAAATCGGAA GGTGTGATTG GGCCCTTCCA GCTGGTGATA GAGACAAAAG AGTCCTACCT TCCAAACGAT TCCCTCGATG TGCGGGTGAA AGTGTTCAAC AGAGAGAGAA AAAAAGAGAA TCTTGTGCTG GAAGACTTCG TATTTTCCAT CAAAAGAGGA AATGACACAG TGTACGAATT TCACTTTCCG CAGCGTGTGG AAAAAGAGAT GGAAGCTTTT GAAAGTGTCC TGGTTTTTGA TCTTTTGAGG GAGGAAGAGC TGTCAAATCT ATCTGGGGGA AATTACACGA TCACAGTCTC TGTCAAGTTG AATGGCCAGA GGGTGGTTAT CAGTAAGAGT GTTTCGGTGA TTGAAAAGTG GCAAGTCGAA GTTGAAGACC TGAAAGATTT TTATTTCCCT TACGAAAACG TGTATTTTTC TGTCTATTTG GAAAACATAA GTTCGAAGAG TCGAAAAATT CACGTGGAGT CGATCAGCCT TATTATCCTT AAGGGGAACG AGACTGTCTT TGAAAGAGAT ATTCCAATAG AAAAAGACTT CGTGATAAAT CCGATGATGG TCGAGCAGAT CCACGAAGTG AGCTTTTCCG TCCCAAAAGA ATCTGGAGAT TACATCGTTG AATTGAAATT GAAGACAAAA GATGGTTTGA TAGAAAGCTC GATACCTCTT TTCGTGACGC AGGAGTATCA AAAAGATTTG AAGGGACTCT CCCTTATCAT CGAAGGGAAG AAGTTTGTAG CATCCGGTGA AAGATACGAT TTCTCTGTGA AGCTTTTGAA CGAAGAAAAG AAACGAAAGT ACATAGTTTT GAAAAACATC ATGATCGTTT TGACGCACAA GGAACCGGTG TTCTCGTATG CTTATTCTGA AGAATACAGG ATGACGATCG AAGGATATTC CTCAAGAGAA ATTTTTAAGA CGACCAGTTA CGATATCATA AAACTCGAGG ATCCCGGGAC TTACAAACTC ATCGTTGTGA TAGAAAGTGA AGAAGACAGG CTGATGAAGG AAATGGAGAT AGTCGTTTCA GAGTGA
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Protein sequence | MRYFSKSPEE WQKRDEERER EFRNRKDRIR RRANFILVVN LVIVVFLVFF TKAFFSNKSE GVIGPFQLVI ETKESYLPND SLDVRVKVFN RERKKENLVL EDFVFSIKRG NDTVYEFHFP QRVEKEMEAF ESVLVFDLLR EEELSNLSGG NYTITVSVKL NGQRVVISKS VSVIEKWQVE VEDLKDFYFP YENVYFSVYL ENISSKSRKI HVESISLIIL KGNETVFERD IPIEKDFVIN PMMVEQIHEV SFSVPKESGD YIVELKLKTK DGLIESSIPL FVTQEYQKDL KGLSLIIEGK KFVASGERYD FSVKLLNEEK KRKYIVLKNI MIVLTHKEPV FSYAYSEEYR MTIEGYSSRE IFKTTSYDII KLEDPGTYKL IVVIESEEDR LMKEMEIVVS E
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