| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0081 |
|---|
| Symbol | |
|---|
| ID | 5170409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 73528 |
|---|
| End bp | 73926 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640562580 |
|---|
| Product | cytidine deaminase |
|---|
| Protein accession | YP_001243686 |
|---|
| Protein GI | 148269226 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0295] Cytidine deaminase |
|---|
| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000436242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGACC CGGAAAAGTT GGTGAAAATG GCTCTGGAAG CCAGGAAAAA GGCGTACGCT
AAGTACTCGG GTTTCAGAGT AGGTGCCGCT TTGCTCGCGA AGAGTGGAAA AATATACACG
GGGGTGAATG TGGAGAATTC TTCTTATGGT CTTACGATCT GCGCTGAAAG AGTAGCCGTG
TTCAAGGCTG TCTCTGAAGG AGAGAGGGAG TTCGTGGCAA TAGCAATAGC ATCGGATTCT
TCAGATAAAA CCGCTCCATG CGGTGCTTGC AGACAGGTTC TTTACGAATT TTCCGATGAT
CTGGACGTGA TAATGGCGGA TAGGGATGGG AATTTTGAAG TGATGAAATT GAAAGATCTC
CTACCAAGAG GATTCAAGCT GGGAGGTGAT GAGCATTAA
|
|---|
| Protein sequence | MVDPEKLVKM ALEARKKAYA KYSGFRVGAA LLAKSGKIYT GVNVENSSYG LTICAERVAV
FKAVSEGERE FVAIAIASDS SDKTAPCGAC RQVLYEFSDD LDVIMADRDG NFEVMKLKDL
LPRGFKLGGD EH
|
|---|
| |