| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0066 |
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| Symbol | |
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| ID | 5171367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 59936 |
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| End bp | 60817 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562564 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001243671 |
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| Protein GI | 148269211 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAG AAATTGATTT CATGGGAAAG TCGAAAATCT TCATCACGAT CTCGCTGATA
CTGATAGCGG TATCCATCGT TTCCATATTC ACGAGAGGAT TCAACTTCGG TGTGGAGTTC
ACCGGTGGCT CTGAAATCAT AGTGAGATTT GAAAACAAGC AGGTCACTGA AGATGACATA
AGGACAGCCA TCTCTCAAAT CTCTGAGGAA TTTGCAAAGG CGAGAATAGT TGAGATTCGT
TCCGCGGGTG ATCCTTCAAA CGTTCAGAAG TACTCCATCA TCGTTCCGAA AACTTACGAA
CCAGATGAAA AGCAGAAGAT TCAAGAAGAG ATGGAAAAAC TCCTTTCTGG TAAGGTGGTG
TCCTTCAATG AGATCAGTGG AACGGCGGCC GAGGAAATCA GAAGGGGAAC GTGGACAGCG
ATTCTGGTGG CTCTTGTCGT GCTCCTCATC TACATAACCA TCAGGTTCAG GTTCATCTTC
GGAATCGCCG CCGTTGTGGC TCTGATACAC GATGTGCTCA TCACCATGGG ATTCTTCTCG
CTGTTCGGCT ACGAGATAAA CGTCGCGGCG GTGGCAGCGT TTCTCACACT GCTTGGTTAC
TCTCTCAACG ACACGATCGT TCTTTCAGAC AGGATCAGGG AGAACATGAG AAGATATCGC
GGGAGGAACA TGGAGAACAT CGTGAACATG AGTATAAATC AGGTGCTCGC CAGAACGATA
AACACCTCTC TCACCACGTT CTTCGTCGTT TTTGTCCTTC TTCTGTTCGC TGGAAACGCC
GTCAAACCTT TCGCTTTCGG AATGACGGTG GGGACGATTG TGGGGACGTA CTCCTCGTTT
TACATTGTCT CACCTATCAT CGTGAAATGG ACGAAACAAT AA
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| Protein sequence | MRKEIDFMGK SKIFITISLI LIAVSIVSIF TRGFNFGVEF TGGSEIIVRF ENKQVTEDDI
RTAISQISEE FAKARIVEIR SAGDPSNVQK YSIIVPKTYE PDEKQKIQEE MEKLLSGKVV
SFNEISGTAA EEIRRGTWTA ILVALVVLLI YITIRFRFIF GIAAVVALIH DVLITMGFFS
LFGYEINVAA VAAFLTLLGY SLNDTIVLSD RIRENMRRYR GRNMENIVNM SINQVLARTI
NTSLTTFFVV FVLLLFAGNA VKPFAFGMTV GTIVGTYSSF YIVSPIIVKW TKQ
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