| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0024 |
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| Symbol | |
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| ID | 5169961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 23337 |
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| End bp | 23810 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562522 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_001243629 |
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| Protein GI | 148269169 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000154554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TCATCGGAAT AGGAGAATAC GCGGTTATGA AGAATCCTGG AGTGATTGTG
ACCCTTGGGT TGGGATCCTG CGTTGCTGTA TGTATGAGAG ATCCTGTGGC AAAAGTCGGA
GCCATGGCAC ACGTTATGCT TCCAGACAGC GGCGGAAAAA CGGACAAACC CGGCAAATAC
GCGGACACGG CTGTAAAAAC GCTGGTGGAA GAGTTGAAGA AAATGGGAGC AAAGGTGGAA
AGACTGGAAG CAAAAATAGC GGGCGGAGCC AGCATGTTTG AATCTACGGG GATGAACATA
GGAGCGAGGA ACGTAGAGGC TGTGAAAAAA CATCTGAAGG ATTTTGGAAT CAAACTACTG
GCGGAGGACA CGGGGGGCAA CAGAGCAAGG AGCGTTGAAT ACAATATTGA AACTGGAAAG
CTTCTCGTGA GAAAAGTAGG TGGTGGTGAA CAATTAGAAA TAAAAGAAAT TTAG
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| Protein sequence | MKKVIGIGEY AVMKNPGVIV TLGLGSCVAV CMRDPVAKVG AMAHVMLPDS GGKTDKPGKY
ADTAVKTLVE ELKKMGAKVE RLEAKIAGGA SMFESTGMNI GARNVEAVKK HLKDFGIKLL
AEDTGGNRAR SVEYNIETGK LLVRKVGGGE QLEIKEI
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