Gene Tpet_0009 details

Gene Information

• Locus tag: Tpet_0009
• ID: 5171563
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 8023
• End bp: 10008
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640562507
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001243614
• Protein GI: 148269154
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACTTC GTGCGAAGGT TTTCCTTGTT ATACTGGTTG TTCTGGCAGG ACTCCTTGTT 
AGTTTTTACC TCATCTATCA GAGCGTTTCT GGTGCGGTTG TTGAAACAGT CAAGAAAAAT 
GCTACTGTTC AGATTCAGGT TCTTTCGAAT TATTTTGCTG AAAAGTTGAA CAAATACGTA 
GAAAGGGCAG TTGCTCTGAC CCAGTCCATG GAAGCACAGC TTCTCGATAC ATATTCCATG 
GCTTCCAACA TGGTCAAGCT GGTGAAAGAA GCTTCCAATA CACTCATTGC TGGAATTACG 
ATAGAAGAAA TGACGGGTTC TGGCTACATT GCTAAAGCTG ACGGATTAGA GCAGATCGAT 
TCTTCTTCGA CCATCTATCA AAAATATATG GATCTTGTTA AGAATTCGCA AAATCCATAT 
TTAGTTACCT CGGATGTCTT TGAAGGTAAA CCCGCCCTCG TTGTTTTAGC TCCGCTAGGT 
GCGTTCGGTG CGGGCACGCT CGGCGCAGTA GGTTATGTGA TAGATCTTTC TCAAAACAAG 
GATTTCTGGC ACACGGTGGC AGAAGGAGGA AAACTGGGAG AGAGCGGCTA CGGGCTTCTT 
GTCACAAGCG ACGGGAAAGT ACTGATTCAC AAAGACATGG GAAACTTCAT GAAAGACGTG 
AAGGAGCTTG GAGACTTTGA GAGAGCATTC GAGGAAGCAA AGAAAGGTGG AGAGAAATAC 
GTAGAGTACG AATACAACGG AGAGAAGAAA TACACCGTGT GGGAAAAAGT GCCCGGATAC 
GACTTCTACA TCTTCTCGAC GGGGTACCTG GATGAACTTC TTGCAGAAGG AAGGAAAGCG 
ACCTTTGGGA CGATAGTGAC GTATGTAGTG TTTGGCGGCG TGATCTTTGC GGTGTTGTTT 
GTTTCGATGA TGCCGATAGT GAAGAGGATG AGAGAGCAGG TGGAGAGAGT GAAGAGATTC 
GGAGAAGGGG ACCTGACAGT AGAGTTCGAA GCGAAAGGGA AAGATGAACT GACCCAGATA 
GAAGAGAGCC TGAAAGAAGC GGTACTATCA CTCAAAGAGA TGATAGTGAG CATCATAGAA 
GCTTCGAAAG AGCTTAGCGG AGCATCAGAA GAGATAAAAG TTCTCTCAGA AGAGAGCCAC 
AAGATGTCAG AGAACCTGCA CGAAGAAGCC AAGAAGATAC TGGACGAGGC GAACAACATG 
AGCAGTGCGC TGACAGAAGT GACGAGTGGA GTAGAAGAAG TGGCAGCGAG TGCGCAGAAC 
ATCTCAAAGA TCACCCAGGA TCTGACAGAA AGGTCAGAAG CGGTGACGAA AGCGGCAAGA 
GAAGGAACAG AGAGAGTAGA AGCGGTGGGA GGAGTCATAA ACAAACTCAA AGGGTCAGCA 
GAAAGACAGA GGGACTACCT GAGAGAACTC GTTGACTCAG CCAAGACGAT AGGGGAGATA 
GTGGACACGA TCAGCTCGAT AGCAGAGCAG ACGAACCTGC TCGCGTTGAA CGCAGCGATA 
GAAGCAGCTC GAGCTGGGGA AGCGGGAAGG GGCTTTGCGG TTGTGGCAGA CGAGATAAGG 
AAACTTGCAG AAGAGAGCCA GAGGGCGACA GAAGACATAG CGAAGATGCT GAGCAATCTG 
AGGACGACGA TAGAACACGT AGAGAACGGC TCGAAAGAGA TGTTCGAAGG AGTGGACGAG 
ATAGCGGTGA TGGGAGAAGA AGTGACGAAG AGATTCAGAG AGATCCTTGG AAGGATAGAA 
GAGATCAACA GCATGATAGA GAACACAGCT GCCACTGCGC AGGAGCAGGG AGCGGCCGCA 
GAAGAGATGG CAAGTGCCAT GGACAACGTC ACAAAGATCG TTGAAGGGGT TGTGGAAAGC 
CTGAACAGGA TGGAGTCTCT CATAGAAAAC CAGACCGAGT CTGCTGCCAG AGTCTCAGAG 
GCTGCCGAAA AACTCTCTTC CCTCTCTGAA CAGCTCTCAA CGCTCGTTCA AAAGTTCAAG 
GTGTGA 

 

Protein sequence

MTLRAKVFLV ILVVLAGLLV SFYLIYQSVS GAVVETVKKN ATVQIQVLSN YFAEKLNKYV 
ERAVALTQSM EAQLLDTYSM ASNMVKLVKE ASNTLIAGIT IEEMTGSGYI AKADGLEQID 
SSSTIYQKYM DLVKNSQNPY LVTSDVFEGK PALVVLAPLG AFGAGTLGAV GYVIDLSQNK 
DFWHTVAEGG KLGESGYGLL VTSDGKVLIH KDMGNFMKDV KELGDFERAF EEAKKGGEKY 
VEYEYNGEKK YTVWEKVPGY DFYIFSTGYL DELLAEGRKA TFGTIVTYVV FGGVIFAVLF 
VSMMPIVKRM REQVERVKRF GEGDLTVEFE AKGKDELTQI EESLKEAVLS LKEMIVSIIE 
ASKELSGASE EIKVLSEESH KMSENLHEEA KKILDEANNM SSALTEVTSG VEEVAASAQN 
ISKITQDLTE RSEAVTKAAR EGTERVEAVG GVINKLKGSA ERQRDYLREL VDSAKTIGEI 
VDTISSIAEQ TNLLALNAAI EAARAGEAGR GFAVVADEIR KLAEESQRAT EDIAKMLSNL 
RTTIEHVENG SKEMFEGVDE IAVMGEEVTK RFREILGRIE EINSMIENTA ATAQEQGAAA 
EEMASAMDNV TKIVEGVVES LNRMESLIEN QTESAARVSE AAEKLSSLSE QLSTLVQKFK 
V