Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0003 |
Symbol | |
ID | 5171493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 2558 |
End bp | 3418 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640562501 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001243608 |
Protein GI | 148269148 |
COG category | [R] General function prediction only |
COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAGTG AACTTTTCTA CAAGAAGCTT GAAAGGTGTG ACCTCTGCCC CAGAAATTGT GGAGTGAACA GACTCAAAGG GGAGAAAGGG GCCTGCGGGG TAGCAAACTC TCCCGTCGTT TCTTCCTGGG GGCCTCACTT TGGAGAGGAA AGAATACTCG TTGGCCGCGG TGGAAGCGGA ACCGTCTTTT TCACCTATTG CAATCTCAAA TGTGTCTACT GTCAGAACTA TGAAATCAGT CAGCTTGGTA TAGGAAAAGA AATCACTGTT GAAGATCTTC TGAGGATATT CACGGAACTT CAGGACATGG GTGTGGAAAA TCTCAACCTG GTGACTCCCA CTCACCAGAT ACCTTTCATT GTCGATGCCT TCGAGAGAAT GGAGAAAGAA ATTCCTGTTG TTTACAACTG TGGAGGATAC GAATCTGTCG ATACCATAAT TTCTCTTGAA GGGTTTGTCG ATATCTATAT GCCAGACTTC AAGTACAGCG ATCCCGAACT TGGAGAAAAG CTCTCTGGTG TGAAAGACTA TCCAAGATTC GCCCTGGAAG CTCTGAAGGT TATGATCGAT CAGATGGGAG AACCGGTGAT AAGAAATGGT GTTATGAAAA AAGGAGTTCT TGTGAGACAC CTCGTTCTTC CCGGTTTCCT TGAAGACAGT TTCGGTGTGA TCGATCTGCT TTCAACGCTG GAGCCGAAAC CACTTGTGAA CATCATGGCG CAGTTCTACC CAGCGTACAG AGCGAAAGAA TATGGACTCG ATAGGTTTGT CACCAGAGAC GAATATCTAA AAGTTGTGGA ATACGCGAAG AAGAAAAAAC TGAATCTCAT AGAAGTAGAG AGGTGGCTGA TGTGGTTGTA A
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Protein sequence | MKSELFYKKL ERCDLCPRNC GVNRLKGEKG ACGVANSPVV SSWGPHFGEE RILVGRGGSG TVFFTYCNLK CVYCQNYEIS QLGIGKEITV EDLLRIFTEL QDMGVENLNL VTPTHQIPFI VDAFERMEKE IPVVYNCGGY ESVDTIISLE GFVDIYMPDF KYSDPELGEK LSGVKDYPRF ALEALKVMID QMGEPVIRNG VMKKGVLVRH LVLPGFLEDS FGVIDLLSTL EPKPLVNIMA QFYPAYRAKE YGLDRFVTRD EYLKVVEYAK KKKLNLIEVE RWLMWL
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