| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1881 |
|---|
| Symbol | |
|---|
| ID | 4600346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008696 |
|---|
| Strand | + |
|---|
| Start bp | 26218 |
|---|
| End bp | 26727 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639772479 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919139 |
|---|
| Protein GI | 119709799 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0419963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATAC TGGTACAGTT TGAGCGGTTC AACAGCGACG TGAAGCGCTG GATAGTCAGC
TACCTATCTC CCCACGGCTG GGAGAAGCTA GCCACCCACA AGGTCTTCGT CGTAGACCCC
GAGAGCGAAG AAAAAGAGGA GGAGGTGGAG GCGCCCATAG GCACCACGAT ACTCGTATCC
GCTAGAAAGG TGGAGTTCTA CGGAAACGCT AGGGGAGACG ACATCGATAA GGCGGGCTAC
GTCAAGGTCT ACGTGGACAG GTGTGGGAGC TTCCCCGTCA TGGCTATCAA AGACCCAGAG
AGGCGTAACA AGGACGTAGT CCTAGACACG CCCCTCGGTA GCTACACGTG CACCGAGGTC
GTAGTCAACG AGGAGGAGGA CTACGTGAAC GTGGCGGACG CAGAGTACAT AGCCGTGGCT
CTGATGGCTA GATTCGTGGC TCTGGTGCCC TCCGAGCCCT TCAAGTACAA GGCGCTGATA
AGCACCAAGG CGAAGCCCAA GCCCGAGTAA
|
|---|
| Protein sequence | MPILVQFERF NSDVKRWIVS YLSPHGWEKL ATHKVFVVDP ESEEKEEEVE APIGTTILVS
ARKVEFYGNA RGDDIDKAGY VKVYVDRCGS FPVMAIKDPE RRNKDVVLDT PLGSYTCTEV
VVNEEEDYVN VADAEYIAVA LMARFVALVP SEPFKYKALI STKAKPKPE
|
|---|
| |