| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1876 |
|---|
| Symbol | |
|---|
| ID | 4600332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008696 |
|---|
| Strand | - |
|---|
| Start bp | 23125 |
|---|
| End bp | 23532 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639772474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919134 |
|---|
| Protein GI | 119709794 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.114049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTACG AGAAATTCGC CGATAAAATC AAGGACGCTA GCCGCGCAGT CCTCAAGCAC
ACCTTCCTAG ACATGCTCGT GCACACCATC CGCGAGGTCA ACGACGTCAA CGTACCCGTC
CTCATCGACG AGATAGAGGA GCTTCAGAAG AAGGCTGAAG AGGAGGGGCT TCAGGCTTGG
GTTGACTTCC TCGGGGCTCT CAAGGCTCTC GTATGCGCCT ACGGGTTCAA GAACACAATC
CTCGTCAGGG CTAGCTACAT GGAGCAGTAC TACCGCATGA TACGCGCCTT GGAGACCGAC
GGCTTCGAAA GCGAGTACTG CGAGTTTCTG ACGTGGCTGG GGACAAGCTT TGAACACACG
TTTCCCCCAA TAGAGAAAAT AGCCCGGGAG CGCGGCATCC TCAGGTAA
|
|---|
| Protein sequence | MVYEKFADKI KDASRAVLKH TFLDMLVHTI REVNDVNVPV LIDEIEELQK KAEEEGLQAW
VDFLGALKAL VCAYGFKNTI LVRASYMEQY YRMIRALETD GFESEYCEFL TWLGTSFEHT
FPPIEKIARE RGILR
|
|---|
| |