Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1823 |
Symbol | |
ID | 4602060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1765169 |
End bp | 1766359 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639774596 |
Product | major facilitator transporter |
Protein accession | YP_921221 |
Protein GI | 119720726 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.262601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGAGGA AGTTACTGTA CTCGATTACC TCACTGTACG TAGCGTACTT CCTGGTGTAC GTCCACAGGA CGATGACGGG AGTAGTCCAG GAGGAGCTTG GAGGGATAGC CAGCGCTCAC GGCCTCCCGC CGGCAGCCTT CACATCGATC GTTGCCGCCG CCTACTTCTA CACGTACGCG GCTATGCAAC TTCCAGCCGG AATTCTGGCG GACGCTCTCG GGGCGAAGAG GTACGTGGGA ACCAGCATGC TCCTGCTCGG CCTGGGATCA GCGTTAGCTT CAACGTGCGA CCCGACGCTG ATTCTAGTGG GTAGGCTCGT GATAGGGGTC GGCGCGGCTT CCGTGTGGGT TTCCCTCCAG CGCGTCATAG GCGTGTACGC CGAGAAAAAC GTCGGAGCAA CGCTCACAGG GCTTGCCCTC GCGGTGGGAA ACCTGGGAGC CCTTTTTGCC ACTGCGCCTC TCAGGGAGGC CGTAGACGCT GTGGGGCTCC GGGCGGTTTT CCTGTACCTC GCCGTCGCCG CCTTTATCTT AAGCGTCGCG GCTTTCCTGG GGATAAACGA CCCCGGGATA TCCCGCGGCT CCTTGAAGAG GGGGCTCGCG GAGACGCTCA GGCAGTTGAA GGTGGTCGCT AGATCCCGGC ATTCAATCGC TTTAGCGCTA GCCTTCGCGG GCACTTACTC GGCTGTGCTG GCGTTCCAGT CGCTCTGGGC GTCGATCTAC GTGTCTAGGT ACTTCCCGGA GTACAGGCGG GAAACCCCAC TCCTCCTACT GCTCCTGGCG CTAGCCTTCC TAGTATCCGT ACCCCTAGTC GGCTACGTCA GCGACGCCGT GCTGAAAAAG AGGAAGCCCG TCCTGCTCGC CGGGATAGTT CTACACTTCT TAGCGTGGGT CGGCCTACTG GTGGCTAGCA GGCTAAGCCT AGGTCTCGCG GAGCTCGAAG CCATTTTCCT GCTACTCGGC GTGGTGGCGG CAACCCACAT GGTGATACCT CCCCTCTCCC GCGAGGCGTA CAGCCCGGAG TTCTCGGGGA CGACGCTGGC GTTCGTAAAC ATGGTCGGCT TCGTGGCGAT AGCCGTTTAC CAGTCGATAG GAGCCGTCGT AGGAGACCCG AGCATACCGC TAGTGGTCTT CGCGCTCGTA TCGCTCGCGG CCCTACTCCT ATCCGGGAGC GTGAGGGAAA CTCTCAGCTA G
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Protein sequence | MERKLLYSIT SLYVAYFLVY VHRTMTGVVQ EELGGIASAH GLPPAAFTSI VAAAYFYTYA AMQLPAGILA DALGAKRYVG TSMLLLGLGS ALASTCDPTL ILVGRLVIGV GAASVWVSLQ RVIGVYAEKN VGATLTGLAL AVGNLGALFA TAPLREAVDA VGLRAVFLYL AVAAFILSVA AFLGINDPGI SRGSLKRGLA ETLRQLKVVA RSRHSIALAL AFAGTYSAVL AFQSLWASIY VSRYFPEYRR ETPLLLLLLA LAFLVSVPLV GYVSDAVLKK RKPVLLAGIV LHFLAWVGLL VASRLSLGLA ELEAIFLLLG VVAATHMVIP PLSREAYSPE FSGTTLAFVN MVGFVAIAVY QSIGAVVGDP SIPLVVFALV SLAALLLSGS VRETLS
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