| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1821 |
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| Symbol | |
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| ID | 4602058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1763588 |
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| End bp | 1764382 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639774594 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_921219 |
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| Protein GI | 119720724 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.174023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCTGA AGATAGACCT CTCCGGGAAG CTGTCGCTAA CGACCGCTTC TTCTAGGGGC
ATAGGCTTTG GGGTGGCGAG GGTGCTCGCC CGCTGCGGTA GCGACGTCAT ACTGGTTTCG
AGGAGCGCGG AGGGGCTTGA GAAGGCTAGA AGCGCGATCC TGAGTGAAAG CCCGGTCGAC
GTGTTCACTG TTCAGGCGGA CTTGACGCGC AGGGAAGACC TGGAGAGGAT GGTTAAAGAG
GTGCTCGGCA TAGGTGTTCC GGACGTGTTC TTCTACTCGA CTGGGGGTCC TAGGCCTGGA
TCCTTCCTGG AGCTCTCCAT GGACGACTGG GACTCCGCCT ACAGGCTCCT CGTCTACCCG
GCGGTATACA TAACTAGGAG CATTCTGCCC GGGATGGTGG AGAAGAGGTG GGGGCGCCTA
ATCTACTTGT CCAGCCTGGC GATAAAGGAG CCGATGCCGA ACCTGGCGCT GAGTAACGTT
ATGCGCATAG CTATTGCGGG GCTCGTGAGA ACCCTTGCGC GAGAGGTGGG CAGGTATGGG
ATTACGGTGA ACGGCATAAT GCCTGGTACG ATTAAGACCT CTAGGGTCGA GGAGCTTGCC
GCAGATATTG CCCGCAGGCA GGGTGTATCC CTCGACGAGG CGTACAGGCA GCTCGCTAGA
GACATACCTG CCGGAAGGCT CGGCTACCCC GAGGAGATCG GCTACCTAGT GGCGTTCCTG
GCCAGCGACT ACGCGTCGTA CATCAACGGA GCAATGATAC CGGTAGACGG TGGCAGGCAG
GTCTCCGTCT TCTAG
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| Protein sequence | MALKIDLSGK LSLTTASSRG IGFGVARVLA RCGSDVILVS RSAEGLEKAR SAILSESPVD
VFTVQADLTR REDLERMVKE VLGIGVPDVF FYSTGGPRPG SFLELSMDDW DSAYRLLVYP
AVYITRSILP GMVEKRWGRL IYLSSLAIKE PMPNLALSNV MRIAIAGLVR TLAREVGRYG
ITVNGIMPGT IKTSRVEELA ADIARRQGVS LDEAYRQLAR DIPAGRLGYP EEIGYLVAFL
ASDYASYING AMIPVDGGRQ VSVF
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