Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1652 |
Symbol | |
ID | 4601729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1599471 |
End bp | 1599986 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639774425 |
Product | nitroreductase |
Protein accession | YP_921050 |
Protein GI | 119720555 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.177323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTACAG CAGAAAAGCT CCCGTGCGCA GATTTCCTTC TGTCCAGGAG GAGCGTGAGG AAGTTCTCAG ACGAGCCGGT CCCAGACGAG CTGATCTACA GGGCAATAGA CATCGCGAGG TTTGCTCCCA GCGCACACAA CGCCCAGCCG TGGAGCTTCC TAGTAGTCAA AGACCGGGAG AAGCTGGAGA AGCTCGCAAA GATACACAGG TGGTCGAAGC CCATAGCGAA CTCGAAGGTC GCGATAATAG TGTTCTCGGA CGAGAAGGTT TCCCCGAAGT CCCACCTCGT CGACGGCGCC ATAGTGGCTA CGTACCTTTG GCTCGCGCTG CACTGCCTAG GCCTCTCGAC GGTCTGGATC TACACCCTGG AGCAAGCGGA GGAGATTAGG CGGATAGTCA ACGCCCCGCC GCACCTGTTC CCCGTCGCGA TATTCCCCGT AGGCTTCCCG GCGGAGTCGC CGCCGCCGAG GCCTAGGCGG AGCCTAGAGG AGCTTGTTCA CGTCGACTCG TACTGA
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Protein sequence | MSTAEKLPCA DFLLSRRSVR KFSDEPVPDE LIYRAIDIAR FAPSAHNAQP WSFLVVKDRE KLEKLAKIHR WSKPIANSKV AIIVFSDEKV SPKSHLVDGA IVATYLWLAL HCLGLSTVWI YTLEQAEEIR RIVNAPPHLF PVAIFPVGFP AESPPPRPRR SLEELVHVDS Y
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