| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1640 |
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| Symbol | |
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| ID | 4600919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1587755 |
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| End bp | 1589266 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639774413 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_921038 |
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| Protein GI | 119720543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.469925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAGC TACGGCGCGA GCTGGGGTTA CTGGAGCTTG TAGGTATCAG CGTGGGCGGG
ATAATAGGCT CGGGTATATT TATGATGCCT TCCCTAACCC TCTCGACGGC AGGTCTCAGC
GCGTTGCTCG CCTGGATCCT CGCCGGGGTA GCGATGACCG TCGTCGCCCT GGTTTTCGCC
GAGCTAGGGT CAGCCTTCGG GGATACAGGT GGGCCCTACG TCTACGCGCG GGCCGCTTTC
GGGCGGACCG TGGGCTTCCT GGTGGGCTGG GGCTACTACG TCTCCTGCGT TCTAACCGTC
TCAGCCGTTA CCGCGGCGTT TGTAAGCTAC CTTGGCTTCT TCGTGCCGGG GCTCGTTGAG
GGTCAGCGGT TAACGCCCGT AGGAGTTCTG GCGGGGCTAG CCTTCCTCTG GTTCCTCACT
TTGCTGAACT ACGTCGGCGT GAAGTACGGG GGGCTCTACG CCTCCGCGAC GACTCTGCTC
AAGGTGTTCG CACTGGCTAT CTTCGCGGCG GCGGGCCTCG CCTACCCGGA GCCCTCGCGG
TTCAACGTGC TGGAGGGGCT GGACGCCGTC TCGCTTGGGC TCGCCGTCTC CCTGGCTGTC
TGGCCGTACA TGGGCTTTGA GAGCGTAACG ATACCGGTCG AGGAGGTGAA GAAGCCTCAG
AGAGACGTAC CACTCTCGAT AATCCTCTCG ATGGGTATCG TCACGGCGGT CTACGTGTTG
ATAGTGCTGT CGTTCCTGAG CCTCCTGGAC TGGAAGTCGC TGGGGCTCGC GCAGGGGGAC
TGGGGGTCCC TGGCGAACCT CTCCTCGCCT TTATCCGACG TCGCGAGGTC GAGGGGGCTA
CTCGCGGTGG CAGTAGCGGT GATGCTGGGC GCGGTCTTCT CGACGGGCGG CGCCAGCGGG
GTGTGGCTTC TCGACAGCGG GCGCTTCCCC TACGCCTTCT CGCAGGCGGG GGACCTTCCC
AAGGTCCTCG GGAAGGTTCA CGACCGCTAC GGTACCCCGC ACGTAGGGCT CCTGCTCTCG
TCTATCGTGG CGAGCGCCGT GCTCGTACTC CTGCCGCTCT TCCCGGCGAT CGCGCTTCTC
GGCGTGATGA CCTCGATAGT CCCGTACGCC GTGTCGTCCC TCGGGCTCGC CGTGCTACGC
GGAAGGGGCG ACTACAGGCC AGCCTTCAGG AACCCCTTCG GGAAGCTCGT TGCCTACGTC
TCCTTCGTTT TCTCGACACT CGTGGCGTAC TGGTCCTGCT GGCCGTGGAC CCTCGTAGGA
GCCCTGCTGA CACTCGCCGT CGTCCCCGTC TTTGCGCGCG TAGCCGGGGT GGGGCTTAGG
AGGGAGGACC TCTGGTACTT CGCCTACCTC TCGGGCTTGA GCGTCGTCTC CCTCCTCGGG
GACCCGTACT TCGAGTACTA CAACTTCCTC CCGGTGCACC CCCTGGGAGT CTTCAAGACC
CCGGTGGACA TAGCCGTCCT GGTGGTCTTC GCGTCGGCGT TCTTCTTCTA CGTGGCGAGG
ACCCGGCGGT AG
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| Protein sequence | MSKLRRELGL LELVGISVGG IIGSGIFMMP SLTLSTAGLS ALLAWILAGV AMTVVALVFA
ELGSAFGDTG GPYVYARAAF GRTVGFLVGW GYYVSCVLTV SAVTAAFVSY LGFFVPGLVE
GQRLTPVGVL AGLAFLWFLT LLNYVGVKYG GLYASATTLL KVFALAIFAA AGLAYPEPSR
FNVLEGLDAV SLGLAVSLAV WPYMGFESVT IPVEEVKKPQ RDVPLSIILS MGIVTAVYVL
IVLSFLSLLD WKSLGLAQGD WGSLANLSSP LSDVARSRGL LAVAVAVMLG AVFSTGGASG
VWLLDSGRFP YAFSQAGDLP KVLGKVHDRY GTPHVGLLLS SIVASAVLVL LPLFPAIALL
GVMTSIVPYA VSSLGLAVLR GRGDYRPAFR NPFGKLVAYV SFVFSTLVAY WSCWPWTLVG
ALLTLAVVPV FARVAGVGLR REDLWYFAYL SGLSVVSLLG DPYFEYYNFL PVHPLGVFKT
PVDIAVLVVF ASAFFFYVAR TRR
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