| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1611 |
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| Symbol | |
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| ID | 4601903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1556223 |
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| End bp | 1557989 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639774384 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_921009 |
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| Protein GI | 119720514 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000292918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCCGG AGCAGGCTAG GAGGGTTGTA CCGCCGTCGG CTAGGTTCAA GGTGATGACG
CTCGCGGAGT ACAGGAGGGT GTATCGGGAG AGCGTGGAGG ACGTCTACGG ATTCTGGTCC
TCCTACGCGC GCCTGTTGCT GTGGAGGAAG CCCTGGGAGA GGGTCGTGGA GGGCGAGGCT
CCCAGGGTTA GGTGGTTCGC GGGCGGCGAG CTGAGCCCCT ACGAGAACGT TGTCTCGAGG
CACAGGGGCA CCCCTGTCTG GAGGAAGGTC GCCGTCCTCT ACGAGTCGGA GAGCGGGGAC
GCCGAGGTTC TGACGTACGA GGGGCTCGAC GCGCTGGCGG GGAGGATAGC CGGCTGGCTC
GAAAGCGTCG GGGTGGGGAG GGGGGACTGG GTCACTGTCT ACTCGCCGCC GAACCCCGAG
TCGCTGGCAT TCATGCTGGC GGCGATGAGG GTGGGCGCCC CCTTCGAGCC CGTCTTCACG
GGCTTCGGCT ACTACGAGCT GGCGAAGCGC ATAGCGAGGA GGGGCTCCAG GGTTGTATTC
ACTGTGGACG GCTACACCCG CAGGGGGAGG GAGGTGGACA CGCTTGGAAG CGTGCTCAGG
GCGGTCGAGG AATCGGGGGC TAAGCCCGTC CTGCTCGTCT CGGAGAGGCT GGGAAGGAAG
GTCCCGGCGG CGCCCGGCGT CTACACGCTC GATGAAGCTC TCTCCTCGGG CGCCTACAGC
GGTAGCGCCG TCCTCGGCTC CTCGGAGCCC CTCTTCGGCC TCCACTCGGC CTACAGGGAC
GACTTCAAGC CGCTGTCCTA CCCGGCTGCG GGCTTCCTCG TACAGGTCTA CGCGACGTCT
AGGTGGATAG GCCTCAAGCC CCGCGAGACT CTCTTCAACA CAGTCTGGCC GGGCTGGATA
ACCGGTGTCT CCTACCTCGT CTTCGGCCCC CTGATGACGG GCTCCACTGT CGTTCTCTAC
GACGGCGCGC CGGACTGGAG GGGCTGGGAC AGGTGGATAA GCATCGTCGA GAGCTACGGT
GTCACGCTGC TCCTGACGAC CTCGGGTGCC CTCAGGCTCA TGTCGAGGCA ACCGGCGGAG
CTTTTCCGGA GCCACGACTA CGACTCCCTG AAGGCAGTGC TGGTAACGGC GGAGCCCCTC
GACGCCGAGA CGTGGGGCTG GGCTTACAGC GTGCTGGGAA CCCTCAAGAG GCCCCTCGTG
GACTCCGTCC CCTCGGAGCT CTCGGGAGCT ATACCCGTGC TGGACCTCTA CATACAGAGC
GAGGTGGGGA CGTTCCTCGT CGGCAACCTC CCGAGCTACA CGTTTACCCA CATAGTCCCC
GGTACCTGCG GCCCGCCGAT GCCAGGCTTC CACGTCGAGG TCCTGGAGGA CGGGAGGCTC
GTGGTCAGGA AGCCTTGGCC CGCCATCCCC GTGGAGGCGC CGGGCGACTT CTGGGAGAAG
TGGCGGGAAG GTTTCTACGA CACGGGCGAC GCCGCCCGCT ACTCGGTTGA CGGCTACATC
GAGGTGCTCG GCAGGAGGGA CGGCGTGATG AAGGTCAGCG GGTACAGGGT GAGCCCCGGC
GCTATAGAAA GGGTGGTCGC GGGGGTCCCC GGGGTGAGAG GGGTCAGGGT CTACGCGAGG
CCAGACCCCC TCAAGTTCGA AGTCCCCGTT GTATCGGTGG AGGGCTCCGC GGACCCCGAG
GCCGTCAGGA AGGCTGTCAG GGAGAAGCTC GGCCCGATAC TCGAACCCGC CCAAGTAACC
GTGCCCCAGG AGTCTCACAG CGCTTAG
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| Protein sequence | MVPEQARRVV PPSARFKVMT LAEYRRVYRE SVEDVYGFWS SYARLLLWRK PWERVVEGEA
PRVRWFAGGE LSPYENVVSR HRGTPVWRKV AVLYESESGD AEVLTYEGLD ALAGRIAGWL
ESVGVGRGDW VTVYSPPNPE SLAFMLAAMR VGAPFEPVFT GFGYYELAKR IARRGSRVVF
TVDGYTRRGR EVDTLGSVLR AVEESGAKPV LLVSERLGRK VPAAPGVYTL DEALSSGAYS
GSAVLGSSEP LFGLHSAYRD DFKPLSYPAA GFLVQVYATS RWIGLKPRET LFNTVWPGWI
TGVSYLVFGP LMTGSTVVLY DGAPDWRGWD RWISIVESYG VTLLLTTSGA LRLMSRQPAE
LFRSHDYDSL KAVLVTAEPL DAETWGWAYS VLGTLKRPLV DSVPSELSGA IPVLDLYIQS
EVGTFLVGNL PSYTFTHIVP GTCGPPMPGF HVEVLEDGRL VVRKPWPAIP VEAPGDFWEK
WREGFYDTGD AARYSVDGYI EVLGRRDGVM KVSGYRVSPG AIERVVAGVP GVRGVRVYAR
PDPLKFEVPV VSVEGSADPE AVRKAVREKL GPILEPAQVT VPQESHSA
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