| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1574 |
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| Symbol | |
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| ID | 4600560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1524540 |
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| End bp | 1527062 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639774347 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_920972 |
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| Protein GI | 119720477 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0162335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACCC TCGTAAGCCT CAAGGCGCAG AACTTCAGGA GGCTTAACTT CCAGGAGCCG
CTAGTGTTCC CGAAGGGCTT CGTCGTTATC AGGGGCAGGA ACGAGGCCGG CAAGTCGACG
ATACTCGAAG CCGTACTCTT CGGGCTTTTC GGCGACTACA GGATAATCCA GGAGCTACGC
GGAGCGCGGG AGGCCGGGCT GGACTCCGTG GTGAACCATA GGTCTGGTAG GGCGAGGGTG
GAGGTCGTAT TCGAGGTCGA GGGTAGGAGG TACAGAGTCG AGAGAGTAGT CGAGAGGGGG
AGGGAGGGCG GGAGGCAGGT CGAGGCAAGG CTCGTAGAGA TAACTCAGGG CGGAGAAAGG
CTGATCGCGA CCTCTCCGTC TAGGGTTAAC GAGGAGGTCT CCAAGCTTGT ACGCGTGAAT
TGGCGCGAAA TGCTGGCTAC GAACGTCATA GCGCAGAAGG ACCTCGAGCA CTTGTTGCGA
ATGGGGAAGA ACGAGAGGGA GAAGGTCATA AACATGATGA TGGGCTTCGA GAGCTACAAC
AAGGCGATAG AGAAGCTAGA GGAGGAGCGT AGAGCCATGC AACAAGAGCT CGAGAAAAAG
GTGCTGGAGA AAAGCTCCCT CGAAGATAAA CTGAGAAACC TGGAGGAGCT CAAAGTCAAA
GTCGAGGAGT ACAGAAGGGA GCTGGAGGAA GTTGAGAAGG AGCTACCCGC CCTGAGGAGC
GAGGAGGAGA GGTCCAGGAA GGTCCGGGAG TACCTCGACG GCTTGCTCAG AGTCCTGAGG
GAGAGGGAGA AGACATCGAG GAGCATCGAG GAGGTGGAGA GGAGAATCCG GGAGCTGGAA
GAGGAGAGGA GGAGCCTTGA GGAGAAGGCG GTGAAGCTTA AAGGAGAGCT AGAGGCCCAG
AGGAGGCGCC TGGGCGAGCT GGAGGAGAGG GGAAGGGCCG TGCGGGAGGC CTTCAGGAAA
GCCGAGGAGG AGAGGAGGAG GGCCATAGAG TTCTCCGGAA AAGCCCTCGA GCTGCTCGAC
AAGTACCAGT CACTCCTCGA CGAGAAGAGG AGGACCCTGG AGAGAATAGC AGAGCTCGAC
AAGAGGCTCG AAGAGCGGCC CAAGCTCCTC GGCGAGTCTG CCAGGCTAGC GGAGGAAGCT
AGGTCCGTGG AGTCCAGGAT AGCAGGGGAA AGCCTCCCGG CTTGGAGCAA GGTGGCGTCC
GCCGCCCTCC TTGTGGCTTC GGCAGTCCTC CTCCTCGTCA ACCCGGCTCT CCTGGCTCTA
AGCATTGCGG GCGCACTCCT AGCAGTACTC TCGCTGGCCG CCGGAGCCTA CAGGAAAAGC
GTGACGGTCT CGCGGCTTAG GCTGGAGAGG GAGAGGCTCG AGCGGGAAAG GGCCCTCGTG
GAGGAGAGGC TCAAGTCTCT CGAAAGGGAC GTGGCGGACA GGGAGAGCCT CTCCAAGAGG
CTAGAGGAGA TCGACGCCAG GCTACTTCGA GCAGAGGAGG AGCTCAAAGG GGTTCTCGGG
GAGGAGTTCT CAAAGCTACC TCTCCAGGAA GTGAGGGAAA GGGTTTCGAG GGAGAGAGCC
CGCCGGGAGG AGGAATACGA GAGGGCGAGG GCGGAGAAGG AGGCCCTGGA AAAGGAAGCT
GCCTCCGTGG GGGAGAGGGT TTCCCAGTTG GAAAAACAGC TGGAGGAAGT CGAGAGGAGC
GTCGAGGAGA GGGTTGAGAG GCTGGGCGAG CTTGCGAAGA GGAGGGAGGA GCTACTGGAC
GCTTTATCCA GGCTAGTGGT CCCGGAGCCG CCGTTCGAGA TAGAGGGGCT CGTGTGGCCC
GTGGACGAGA GAGACATCGA GGGCGTAGAG GTTGTGTACA ACACCTACGA TAGGCTTTAC
CAGCAGGTTT CCAGGAGGCT GGCCGAAGCC GAGGAGAGGA GGAGGGTTCT AACGGGCGAG
CTGAGAGACG CGGAGAAGAA GCTGGAGGAG CTACCCGCGG TAAGGGATAG GCTGGCGAAG
CTGGAGTCCG AGGTTAGGGA GCTCGAGGTA GAGGTTAACG CGAGGAGGGA GGCCGTAAAG
CTCCTCAGGG AAGTCTCCGC GAAGAGGCGC GCCGCCTTCG CCCCCAGCGT CGAGCAGAAC
ATGAACTGGA TCGTGTCGTA CGTGACCAAC GGGAGGTACA AGGCCGTGAA GATCGACCCT
GAGAGGTATG ACGTGTCCGT GTACGACGCG GAGGCTGGGA GGTGGATGCA GAGGGATATC
TACAGCGGGG GAACCAACGA CCAGTTCCTC TTGGCGATGA GAATTGCCTT CACGCTCTCG
CTACTACCCA GCGCTAAGGG CACGTACCCC AGGTTCCTCT TCCTCGACGA GCCGCTGGGC
TCCTCGGACG CGGAGAGGAG GGGCAGGATC GTGGAGCTAC TTGCACGGGA GCTCACGAGG
TTCTTCGACC AGGTCTTCCT CATAACGCAC GTAGACATAG AGGAGCCGCC CGGCGCCACG
GTGGTGGAGA TAGAGGACGG AAAGCCCGCG CGGATATACA CGCCTGGAGC AGAGGAAGGA
TAG
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| Protein sequence | MVTLVSLKAQ NFRRLNFQEP LVFPKGFVVI RGRNEAGKST ILEAVLFGLF GDYRIIQELR
GAREAGLDSV VNHRSGRARV EVVFEVEGRR YRVERVVERG REGGRQVEAR LVEITQGGER
LIATSPSRVN EEVSKLVRVN WREMLATNVI AQKDLEHLLR MGKNEREKVI NMMMGFESYN
KAIEKLEEER RAMQQELEKK VLEKSSLEDK LRNLEELKVK VEEYRRELEE VEKELPALRS
EEERSRKVRE YLDGLLRVLR EREKTSRSIE EVERRIRELE EERRSLEEKA VKLKGELEAQ
RRRLGELEER GRAVREAFRK AEEERRRAIE FSGKALELLD KYQSLLDEKR RTLERIAELD
KRLEERPKLL GESARLAEEA RSVESRIAGE SLPAWSKVAS AALLVASAVL LLVNPALLAL
SIAGALLAVL SLAAGAYRKS VTVSRLRLER ERLERERALV EERLKSLERD VADRESLSKR
LEEIDARLLR AEEELKGVLG EEFSKLPLQE VRERVSRERA RREEEYERAR AEKEALEKEA
ASVGERVSQL EKQLEEVERS VEERVERLGE LAKRREELLD ALSRLVVPEP PFEIEGLVWP
VDERDIEGVE VVYNTYDRLY QQVSRRLAEA EERRRVLTGE LRDAEKKLEE LPAVRDRLAK
LESEVRELEV EVNARREAVK LLREVSAKRR AAFAPSVEQN MNWIVSYVTN GRYKAVKIDP
ERYDVSVYDA EAGRWMQRDI YSGGTNDQFL LAMRIAFTLS LLPSAKGTYP RFLFLDEPLG
SSDAERRGRI VELLARELTR FFDQVFLITH VDIEEPPGAT VVEIEDGKPA RIYTPGAEEG
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